BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025119
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   147   1e-33
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar...   132   2e-29
emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]                   132   2e-29
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
emb|CBI19766.3| unnamed protein product [Vitis vinifera]              122   3e-26

>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355517031|gb|AES98654.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  147 bits (371), Expect = 1e-33
 Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -3

Query: 525  VGCSWIEYNNSIHSFASSHQHEINGEAIYTWIRNITEKSETQSHVDHLTVEEEEKEESGR 346
            +G SWIE NN +H+F    Q     + +++W++ +    +T    + L +EEEEKE +  
Sbjct: 757  IGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTHVSDNELYIEEEEKENTSS 816

Query: 345  IHSEKIALALLLISPQ-KSQSIRIVKNMRMCQNCHRTAKYISKAYGCDIYLYDSKCFHHF 169
            +HSEK+A A  LI P  K Q +RIVK +RMC++CH TAKYIS AYGC+IYL DS C HHF
Sbjct: 817  VHSEKLAFAFALIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGCEIYLSDSNCLHHF 876

Query: 168  KDGNCSCGDYW 136
            K G+CSC DYW
Sbjct: 877  KGGHCSCRDYW 887


>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g19720; AltName: Full=Protein DYW7
            gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
            [Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 894

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/133 (46%), Positives = 90/133 (67%), Gaps = 3/133 (2%)
 Frame = -3

Query: 525  VGCSWIEYNNSIHSFASSHQHEINGEAIYTWIRNITE-KSETQSHVDHLTVEEEEKEESG 349
            +G SWIE  N IH+F +  Q ++  + +Y  +  ++   + +  +   L +EEE +EE+ 
Sbjct: 762  LGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETC 821

Query: 348  RIHSEKIALALLLISPQKSQ--SIRIVKNMRMCQNCHRTAKYISKAYGCDIYLYDSKCFH 175
             IHSEK A+A  LIS   +   +IRI+KN+RMC++CH TAKY+SK YGCDI L D++C H
Sbjct: 822  GIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLH 881

Query: 174  HFKDGNCSCGDYW 136
            HFK+G+CSC DYW
Sbjct: 882  HFKNGDCSCKDYW 894


>emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]
          Length = 406

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/133 (46%), Positives = 90/133 (67%), Gaps = 3/133 (2%)
 Frame = -3

Query: 525 VGCSWIEYNNSIHSFASSHQHEINGEAIYTWIRNITE-KSETQSHVDHLTVEEEEKEESG 349
           +G SWIE  N IH+F +  Q ++  + +Y  +  ++   + +  +   L +EEE +EE+ 
Sbjct: 274 LGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETC 333

Query: 348 RIHSEKIALALLLISPQKSQ--SIRIVKNMRMCQNCHRTAKYISKAYGCDIYLYDSKCFH 175
            IHSEK A+A  LIS   +   +IRI+KN+RMC++CH TAKY+SK YGCDI L D++C H
Sbjct: 334 GIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLH 393

Query: 174 HFKDGNCSCGDYW 136
           HFK+G+CSC DYW
Sbjct: 394 HFKNGDCSCKDYW 406


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  129 bits (323), Expect = 4e-28
 Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
 Frame = -3

Query: 531  QSVGCSWIEYNNSIHSFASSHQHEINGEAIYTWIRNITEKSETQSHVDHLTVEEEEKEES 352
            Q +GCSWIE  N +H+F +  +     + +++WI N+  K +     D L +EEEEKEE 
Sbjct: 764  QPLGCSWIEAKNIVHTFVADDRSRPYFDFLHSWIENVARKVKAPDQHDRLFIEEEEKEEI 823

Query: 351  GRIHSEKIALALLLISPQ-KSQSIRIVKNMRMCQNCHRTAKYISKAYGCDIYLYDSKCFH 175
            G +HSEK+ALA  LI P    +S+RIVKN+RMC +CH TAK++S  Y C+IYL DSKC H
Sbjct: 824  GGVHSEKLALAFALIDPSCAPRSVRIVKNLRMCGDCHGTAKFLSMLYSCEIYLSDSKCLH 883


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = -3

Query: 390 DHLTVEEEEKEESGRIHSEKIALALLLISPQKS-QSIRIVKNMRMCQNCHRTAKYISKAY 214
           D L +EEEEKEE G +HSEK+ALA  LI P  + +S+RIVKN+RMC +CH TAK++S  Y
Sbjct: 409 DRLFIEEEEKEEIGGVHSEKLALAFALIDPSCAPRSVRIVKNLRMCGDCHGTAKFLSMLY 468

Query: 213 GCDIYLYDSKCFHHFKDGNCSCGDYW 136
            C+IYL DSKC H FK+G CSCGDYW
Sbjct: 469 SCEIYLSDSKCLHWFKNGRCSCGDYW 494