BLASTX nr result
ID: Lithospermum22_contig00025113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00025113
(480 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 80 2e-30
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 80 8e-30
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 96 4e-18
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 90 2e-16
gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo... 88 8e-16
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 80.5 bits (197), Expect(3) = 2e-30
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +1
Query: 271 LEERRRIVSLLKDNLTQAQSRMKKYADLGRTERSFQQGDLVYLKLQPYRQNSISLRKNLK 450
LEE++ ++ LK+NL QAQ+RMKKYADL R+ER GD+VYLK+QPYR + L++ LK
Sbjct: 1163 LEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALK 1222
Query: 451 LAFKYYEPF 477
L +Y PF
Sbjct: 1223 LTSIFYGPF 1231
Score = 59.3 bits (142), Expect(3) = 2e-30
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Frame = +2
Query: 77 VNQCLETYLRCMCSDRPQDWG*WLAMAEFWYNSMWMTA-----FQVLYDINLPSPLLH 235
VNQC+E+YLRCM P+ W WL +AE+WYN+ + TA FQ LY P PL++
Sbjct: 1092 VNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALY--GFPPPLIN 1147
Score = 37.7 bits (86), Expect(3) = 2e-30
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 10 QELFNRMGVKLHHSTSYHPQSDGQS 84
QELF M V+L ST+YHPQ+DGQ+
Sbjct: 1065 QELFKSMKVQLRFSTAYHPQTDGQT 1089
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 79.7 bits (195), Expect(3) = 8e-30
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +1
Query: 214 PPISTSPYF--KDVHIMSAN*LEERRRIVSLLKDNLTQAQSRMKKYADLGRTERSFQQGD 387
PPI PY K + A L+ER ++ LK +L +AQ RMK++AD RTER+F GD
Sbjct: 1279 PPIHL-PYLPGKSKVAVVARSLQERENMLLFLKFHLMRAQHRMKQFADQHRTERTFDIGD 1337
Query: 388 LVYLKLQPYRQNSISLRKNLKLAFKYYEPFE 480
VY+KLQPYRQ S+ LR N KL+ KY+ P++
Sbjct: 1338 FVYVKLQPYRQQSVVLRVNQKLSPKYFGPYK 1368
Score = 60.5 bits (145), Expect(3) = 8e-30
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Frame = +2
Query: 74 MVNQCLETYLRCMCSDRPQDWG*WLAMAEFWYN-----SMWMTAFQVLYDINLPSPLLHI 238
+VN+CLE YLRCMC RP W WL +AE+WYN S MT F+++Y +P +H+
Sbjct: 1227 VVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYG---QAPPIHL 1283
Score = 35.4 bits (80), Expect(3) = 8e-30
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 4 F*QELFNRMGVKLHHSTSYHPQSDGQS 84
F +E F GV+L S++YHPQSDGQ+
Sbjct: 1199 FWKEFFKLQGVELRMSSAYHPQSDGQT 1225
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 95.5 bits (236), Expect = 4e-18
Identities = 67/177 (37%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Frame = +1
Query: 10 QELFNRMGVKLHHSTSYHPQSDGQS--------------VFGDLSKMYV***TSRLGLMV 147
Q +F MG L STSYHPQSDGQ+ VF + + T+
Sbjct: 1179 QNVFKSMGTTLRFSTSYHPQSDGQTERVNQCVEAYLRCMVFQEPRDWHKWLPTAEWWYNT 1238
Query: 148 SYG*VLV*LHVDDCFSSFV*YKPPISTSPYFKDVHIMSAN*LEE-------RRRIVSLLK 306
SY L Y+ P + N EE R ++ LK
Sbjct: 1239 SYHTSL----------QVTPYEALYGVHPPQNGEQAIPGNVTEEIRITAQQREELMLRLK 1288
Query: 307 DNLTQAQSRMKKYADLGRTERSFQQGDLVYLKLQPYRQNSISLRKNLKLAFKYYEPF 477
DNL +AQ+R+KK+AD R+ERSFQ+GD+VYLK+QPYRQN+ LR +LKL K+Y PF
Sbjct: 1289 DNLLRAQNRIKKFADRLRSERSFQEGDMVYLKMQPYRQNTFGLRGSLKLRAKFYGPF 1345
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 90.1 bits (222), Expect = 2e-16
Identities = 63/173 (36%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Frame = +1
Query: 10 QELFNRMGVKLHHSTSYHPQSDGQS--------------VFGDLSKMYV***TSRLGLMV 147
QE+F M VKL ST+YHPQ DGQ+ F + K Y S L L
Sbjct: 1204 QEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWY-----SWLALAE 1258
Query: 148 SYG*VLV*LHVDDC-FSSFV*YKPP-ISTSPYFKDVHIMSAN*LEERRRIVSLLKDNLTQ 321
+ + F + Y PP I+ ++ + +EE+ I++ LK++L
Sbjct: 1259 WWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKNSLAD 1318
Query: 322 AQSRMKKYADLGRTERSFQQGDLVYLKLQPYRQNSISLRKNLKLAFKYYEPFE 480
AQ RMK +AD RTER+ + GD+VYLKL+PYRQ++ +R +LKL K+Y PF+
Sbjct: 1319 AQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFK 1371
>gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group]
gi|31433481|gb|AAP54986.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1409
Score = 87.8 bits (216), Expect = 8e-16
Identities = 62/172 (36%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Frame = +1
Query: 10 QELFNRMGVKLHHSTSYHPQSDGQS--------------VFGDLSKMYV***TSRLGLMV 147
QE+F M V+L ST+YHPQ+DGQ+ F + + Y +
Sbjct: 1236 QEVFKAMKVQLRFSTAYHPQTDGQTERVNQCLESYLRSMAFQEPHQWYSWLALAEWWYNT 1295
Query: 148 SYG*VLV*LHVDDCFSSFV*YKPP-ISTSPYFKDVHIMSAN*LEERRRIVSLLKDNLTQA 324
+Y L F + Y PP I+ +V + E++ I+ LK +LT+A
Sbjct: 1296 TYHTSLQMTP----FQAMYGYPPPQINEFSVPCNVSAEARVTTEQKEAILRKLKSSLTEA 1351
Query: 325 QSRMKKYADLGRTERSFQQGDLVYLKLQPYRQNSISLRKNLKLAFKYYEPFE 480
Q RMK YAD R+ERS GD+VY+KLQPYRQ + +R +LKL K+Y PF+
Sbjct: 1352 QRRMKHYADRNRSERSLAVGDMVYIKLQPYRQTAFGIRGSLKLRSKFYGPFK 1403