BLASTX nr result

ID: Lithospermum22_contig00025058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025058
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23362.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   134   8e-30
ref|XP_002527924.1| multidrug resistance pump, putative [Ricinus...   126   2e-27
ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
emb|CAN68575.1| hypothetical protein VITISV_033685 [Vitis vinifera]   122   3e-26

>emb|CBI23362.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/134 (53%), Positives = 86/134 (64%)
 Frame = -2

Query: 404  PHISCPPKPKETMEQANLPLLTNTQDEXXXXXXXXXXXNQPMTAISKNFTLDGEDMEPIT 225
            PH S   +    ME    PLL+  QD+                ++   F  D  D+ PI 
Sbjct: 635  PHFS---ESLNIMENGKQPLLSARQDDETPNRTAA-------NSLLATFNADESDIGPIN 684

Query: 224  SMSDFFKNFYIESLMLWYLAGPAIFTILCQYSMGAITQVLAGHVGTLELASISLENSVIG 45
             + DF+K F +ES  LWYLAGPAIFT LCQYS+GAITQV AGHVGTLELA++S+ENSVI 
Sbjct: 685  GVRDFYKEFIVESKKLWYLAGPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIA 744

Query: 44   GFAFGVMLGMGSAL 3
            GF+FGVMLGMGSAL
Sbjct: 745  GFSFGVMLGMGSAL 758



 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/81 (61%), Positives = 65/81 (80%)
 Frame = -2

Query: 245 EDMEPITSMSDFFKNFYIESLMLWYLAGPAIFTILCQYSMGAITQVLAGHVGTLELASIS 66
           +DM+PI  + DFF+ F +ES  LW++AGPAIFT LC+YS+GAITQV  GH+G L+LA+ +
Sbjct: 67  DDMDPINGVGDFFREFRVESKKLWHIAGPAIFTYLCRYSLGAITQVFVGHIGALQLAAFA 126

Query: 65  LENSVIGGFAFGVMLGMGSAL 3
           +ENSVI  F+ G MLGMGSAL
Sbjct: 127 VENSVISMFSLGTMLGMGSAL 147


>ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
          Length = 544

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/134 (53%), Positives = 86/134 (64%)
 Frame = -2

Query: 404 PHISCPPKPKETMEQANLPLLTNTQDEXXXXXXXXXXXNQPMTAISKNFTLDGEDMEPIT 225
           PH S   +    ME    PLL+  QD+                ++   F  D  D+ PI 
Sbjct: 27  PHFS---ESLNIMENGKQPLLSARQDDETPNRTAA-------NSLLATFNADESDIGPIN 76

Query: 224 SMSDFFKNFYIESLMLWYLAGPAIFTILCQYSMGAITQVLAGHVGTLELASISLENSVIG 45
            + DF+K F +ES  LWYLAGPAIFT LCQYS+GAITQV AGHVGTLELA++S+ENSVI 
Sbjct: 77  GVRDFYKEFIVESKKLWYLAGPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIA 136

Query: 44  GFAFGVMLGMGSAL 3
           GF+FGVMLGMGSAL
Sbjct: 137 GFSFGVMLGMGSAL 150


>ref|XP_002527924.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223532699|gb|EEF34481.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 531

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/91 (63%), Positives = 73/91 (80%)
 Frame = -2

Query: 275 AISKNFTLDGEDMEPITSMSDFFKNFYIESLMLWYLAGPAIFTILCQYSMGAITQVLAGH 96
           + S  F  D +D+ PIT   +FF+ FY ES  LWYLAGPAIFT +CQYS+GA+TQV +G 
Sbjct: 43  SFSSAFVPDSDDIPPITGFRNFFREFYRESKKLWYLAGPAIFTSICQYSLGAVTQVFSGQ 102

Query: 95  VGTLELASISLENSVIGGFAFGVMLGMGSAL 3
           VGTL+LA++S+ENSVI GF+FG+MLGMGSAL
Sbjct: 103 VGTLDLAAVSVENSVIAGFSFGIMLGMGSAL 133


>ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|222837995|gb|EEE76360.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/92 (66%), Positives = 76/92 (82%)
 Frame = -2

Query: 278 TAISKNFTLDGEDMEPITSMSDFFKNFYIESLMLWYLAGPAIFTILCQYSMGAITQVLAG 99
           ++I+ +FT D +D+  I S+ DF   F  ES  LWYLAGPAIFT LCQYS+GAITQ+LAG
Sbjct: 27  SSIASSFTPDPDDIPLINSVRDFSIEFCRESKKLWYLAGPAIFTTLCQYSLGAITQLLAG 86

Query: 98  HVGTLELASISLENSVIGGFAFGVMLGMGSAL 3
           HVGTL+LA++S+ENSVI GF+FG+MLGMGSAL
Sbjct: 87  HVGTLDLAAVSVENSVIAGFSFGIMLGMGSAL 118


>emb|CAN68575.1| hypothetical protein VITISV_033685 [Vitis vinifera]
          Length = 494

 Score =  122 bits (306), Expect = 3e-26
 Identities = 63/120 (52%), Positives = 78/120 (65%)
 Frame = -2

Query: 368 MEQANLPLLTNTQDEXXXXXXXXXXXNQPMTAISKNFTLDGEDMEPITSMSDFFKNFYIE 189
           ME    PLL+  QD+                ++   F  D  D+ PI  + DF+K F +E
Sbjct: 1   MENGKQPLLSARQDDETPNRTAA-------NSLLATFNADESDIGPINGVRDFYKEFIVE 53

Query: 188 SLMLWYLAGPAIFTILCQYSMGAITQVLAGHVGTLELASISLENSVIGGFAFGVMLGMGS 9
           S  LWYLAGPAIFT LCQYS+GAITQV AGHVGTLELA++S+ENSVI GF+FGVM+  G+
Sbjct: 54  SKKLWYLAGPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMVQPGN 113


Top