BLASTX nr result

ID: Lithospermum22_contig00024868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024868
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47989.1| unknown [Lotus japonicus]                               75   5e-12
ref|XP_003536732.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...    75   7e-12
ref|XP_003536731.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...    75   7e-12
gb|ACU14657.1| unknown [Glycine max]                                   75   7e-12
ref|XP_002310069.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>gb|AFK47989.1| unknown [Lotus japonicus]
          Length = 206

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 3/58 (5%)
 Frame = +1

Query: 43  GGEQQDGGAA-PR--SRRPFTDLSQEDSDLALARTLQEQERAYMMLSMSADGIPYGSW 207
           GGEQ  G A  PR  SR PF++LSQ D+DLALARTLQEQERAYMML M+ DG  YGSW
Sbjct: 71  GGEQPTGSAPNPRQPSRTPFSNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSW 128


>ref|XP_003536732.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform 2
           [Glycine max]
          Length = 353

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/59 (66%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 43  GGEQQDGGAAPR----SRRPFTDLSQEDSDLALARTLQEQERAYMMLSMSADGIPYGSW 207
           G  ++ G AAP     SR PFT+LSQ D+DLALARTLQEQERAYMML M+ DG  YGSW
Sbjct: 67  GEGEETGSAAPNPRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSW 125


>ref|XP_003536731.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform 1
           [Glycine max]
          Length = 344

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/59 (66%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 43  GGEQQDGGAAPR----SRRPFTDLSQEDSDLALARTLQEQERAYMMLSMSADGIPYGSW 207
           G  ++ G AAP     SR PFT+LSQ D+DLALARTLQEQERAYMML M+ DG  YGSW
Sbjct: 67  GEGEETGSAAPNPRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSW 125


>gb|ACU14657.1| unknown [Glycine max]
          Length = 222

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/59 (66%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 43  GGEQQDGGAAPR----SRRPFTDLSQEDSDLALARTLQEQERAYMMLSMSADGIPYGSW 207
           G  ++ G AAP     SR PFT+LSQ D+DLALARTLQEQERAYMML M+ DG  YGSW
Sbjct: 67  GEGEETGSAAPNPRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSW 125


>ref|XP_002310069.1| predicted protein [Populus trichocarpa] gi|222852972|gb|EEE90519.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = +1

Query: 40  GGGEQQDGGAAPRS--RRPFTDLSQEDSDLALARTLQEQERAYMMLSMSADGIPYGSW 207
           G GE++ GG   ++  R PFT+LSQ D+DLALARTLQEQERAYMML M+ DG  YGSW
Sbjct: 48  GEGEREGGGPQSQTSGRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSW 105


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