BLASTX nr result

ID: Lithospermum22_contig00024863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024863
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271403.1| PREDICTED: uncharacterized protein LOC100259...   121   3e-25
emb|CAN60871.1| hypothetical protein VITISV_016379 [Vitis vinifera]   121   3e-25
ref|XP_002532992.1| nucleic acid binding protein, putative [Rici...   116   1e-23
ref|XP_002323520.1| predicted protein [Populus trichocarpa] gi|2...   110   7e-22
emb|CAN72262.1| hypothetical protein VITISV_037365 [Vitis vinifera]   108   2e-21

>ref|XP_002271403.1| PREDICTED: uncharacterized protein LOC100259726 [Vitis vinifera]
          Length = 303

 Score =  121 bits (303), Expect = 3e-25
 Identities = 66/136 (48%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
 Frame = -1

Query: 896 YLMWMKSRHNIVMGXXXXXXXXXXXXSWEEEAFVDGKAAGGVLGGFVWPPRSYFCSFCKR 717
           + MW K +H++               SWEE+AF +   A G LGG +WPPRSY CSFCKR
Sbjct: 6   FWMWTKRKHSL-SSHVQASTNPSYSDSWEEQAFAED--AAGPLGGCIWPPRSYSCSFCKR 62

Query: 716 EFRSAQALGGHMNVHRRDRAKLKQSLIISPPPTTQVLHHHDQNYTSPTTTSFTAL----P 549
           EFRSAQALGGHMNVHRRDRA+LKQ    SP P  ++LHHH QN+ + T    ++L    P
Sbjct: 63  EFRSAQALGGHMNVHRRDRARLKQ----SPSPHNEILHHHHQNHHNHTQHPCSSLGFQYP 118

Query: 548 AH--SFYFSPSKLSSP 507
           +   +F ++P+  S P
Sbjct: 119 SQVCTFVYNPNPNSDP 134


>emb|CAN60871.1| hypothetical protein VITISV_016379 [Vitis vinifera]
          Length = 297

 Score =  121 bits (303), Expect = 3e-25
 Identities = 66/136 (48%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
 Frame = -1

Query: 896 YLMWMKSRHNIVMGXXXXXXXXXXXXSWEEEAFVDGKAAGGVLGGFVWPPRSYFCSFCKR 717
           + MW K +H++               SWEE+AF +   A G LGG +WPPRSY CSFCKR
Sbjct: 6   FWMWTKRKHSL-SSHVQASTNPSYSDSWEEQAFAED--AAGPLGGCIWPPRSYSCSFCKR 62

Query: 716 EFRSAQALGGHMNVHRRDRAKLKQSLIISPPPTTQVLHHHDQNYTSPTTTSFTAL----P 549
           EFRSAQALGGHMNVHRRDRA+LKQ    SP P  ++LHHH QN+ + T    ++L    P
Sbjct: 63  EFRSAQALGGHMNVHRRDRARLKQ----SPSPHNEILHHHHQNHHNHTQHPCSSLGFQYP 118

Query: 548 AH--SFYFSPSKLSSP 507
           +   +F ++P+  S P
Sbjct: 119 SQVCTFVYNPNPNSDP 134


>ref|XP_002532992.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527221|gb|EEF29384.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score =  116 bits (290), Expect = 1e-23
 Identities = 65/144 (45%), Positives = 81/144 (56%), Gaps = 16/144 (11%)
 Frame = -1

Query: 890 MWMKSRHNIVMGXXXXXXXXXXXXS--WEEEAFVDGKAAGGVLGGFVWPPRSYFCSFCKR 717
           MW K +HN+                  WEE+AF +   A G LGG +WPPRSY CSFC+R
Sbjct: 8   MWTKRKHNLTSSHLQASTRPPPSIDDSWEEQAFAED--AAGPLGGCIWPPRSYSCSFCRR 65

Query: 716 EFRSAQALGGHMNVHRRDRAKLKQSLIISPPPTTQVLHH-----------HDQNYTSPTT 570
           EFRSAQALGGHMNVHRRDRA+LKQS    P P  +V+HH           H+  + SP T
Sbjct: 66  EFRSAQALGGHMNVHRRDRARLKQS---PPGPHNEVVHHPPHHHHDDHQNHNNLFPSPHT 122

Query: 569 TSFTALPAH---SFYFSPSKLSSP 507
           +     P+H   +  +SP+  S P
Sbjct: 123 SLAFQYPSHQICALVYSPNPNSDP 146


>ref|XP_002323520.1| predicted protein [Populus trichocarpa] gi|222868150|gb|EEF05281.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  110 bits (274), Expect = 7e-22
 Identities = 67/143 (46%), Positives = 81/143 (56%), Gaps = 16/143 (11%)
 Frame = -1

Query: 815 WEEEAFVDGKAAGGVLGGFVWPPRSYFCSFCKREFRSAQALGGHMNVHRRDRAKLKQSLI 636
           WEE+AF +   A G LGG +WPPRSY CSFC+REFRSAQALGGHMNVHRRDRA+LKQ   
Sbjct: 32  WEEQAFAED--AAGPLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQ--- 86

Query: 635 ISPPPTTQVLHHHDQN--------YTS-----PT---TTSFTALPAHSFYFSPSKLSSPR 504
            SP P  ++LHH  Q         YTS     P+   T  +   P  +  F PS+ SS R
Sbjct: 87  -SPSPHNEILHHEHQKPLNHLQNPYTSFGFQYPSQLCTLDYCPNPNSNPGFIPSRTSSSR 145

Query: 503 GAKYEEPIMLNQELDCFVDKKFS 435
                  + +    + F DK  S
Sbjct: 146 -------VSITSTQENFCDKTIS 161


>emb|CAN72262.1| hypothetical protein VITISV_037365 [Vitis vinifera]
          Length = 866

 Score =  108 bits (271), Expect = 2e-21
 Identities = 64/129 (49%), Positives = 78/129 (60%)
 Frame = -1

Query: 896 YLMWMKSRHNIVMGXXXXXXXXXXXXSWEEEAFVDGKAAGGVLGGFVWPPRSYFCSFCKR 717
           YLM M  +H  ++             SWEE+AF +   A G LGG VWPPRSY CSFC+R
Sbjct: 6   YLMLMNKKH--ILNSHCQAPMSLFNDSWEEQAFAED--AAGALGGCVWPPRSYSCSFCRR 61

Query: 716 EFRSAQALGGHMNVHRRDRAKLKQSLIISPPPTTQVLHHHDQNYTSPTTTSFTALPAHSF 537
           EF+SAQALGGHMN+HRRDRA+LKQSL  SP   T +   H QN+ S    S       S 
Sbjct: 62  EFKSAQALGGHMNIHRRDRARLKQSL--SPHNETDL---HSQNHGSHKPDSNPGPGFLSS 116

Query: 536 YFSPSKLSS 510
             SPS++S+
Sbjct: 117 PLSPSRVSA 125


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