BLASTX nr result

ID: Lithospermum22_contig00024829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024829
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242196.1| uncharacterized protein LOC100810573 [Glycin...    75   7e-12
ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|1...    75   7e-12
ref|XP_003526716.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    74   1e-11
ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003602252.1| Ubiquitin ligase SINAT3 [Medicago truncatula...    72   5e-11

>ref|NP_001242196.1| uncharacterized protein LOC100810573 [Glycine max]
           gi|255636330|gb|ACU18504.1| unknown [Glycine max]
          Length = 323

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/71 (57%), Positives = 49/71 (69%)
 Frame = +2

Query: 137 MDLDNIECVSSSDGMEEDEIHNPSLLSQFAASSKSSHHNAQINVINSNSPNRIGLHPSTS 316
           MDL ++ECVSSSDGM+EDEIH     S+F   S +   N   + INS  PN  G+ P+TS
Sbjct: 1   MDLMSVECVSSSDGMDEDEIHANHHHSEF---SSTKPRNGGTSNINSVGPN--GIAPATS 55

Query: 317 VHELLECPVCT 349
           VHELLECPVCT
Sbjct: 56  VHELLECPVCT 66


>ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|118486267|gb|ABK94975.1|
           unknown [Populus trichocarpa]
           gi|222868402|gb|EEF05533.1| predicted protein [Populus
           trichocarpa]
          Length = 332

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = +2

Query: 137 MDLDNIECVSSSDGMEEDEIHNPSLLSQFAASSKSSHHNAQINVINSNS---PNRIGLHP 307
           M+ DNIECVSSSDG++EDEIH+ +L       + S  HN   N  N N+        + P
Sbjct: 1   MEFDNIECVSSSDGLDEDEIHHHNLQHHLHQFASSKPHNVNNNHNNGNTIVVGGPTAIAP 60

Query: 308 STSVHELLECPVCT 349
           +TSVHELLECPVCT
Sbjct: 61  ATSVHELLECPVCT 74


>ref|XP_003526716.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Glycine max]
          Length = 327

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = +2

Query: 137 MDLDNIECVSSSDGMEEDEIH-NPSLLSQFAASSKSSHHNAQINVINSNSPNRIGLHPST 313
           MDL+++ECVSSSDGM+EDEIH N    S+F   S +   N   + INS  PN I   P+T
Sbjct: 1   MDLESVECVSSSDGMDEDEIHANHHHHSEF---SSTKPRNGGTSNINSVGPNAIA--PAT 55

Query: 314 SVHELLECPVCT 349
           SVHELLECPVCT
Sbjct: 56  SVHELLECPVCT 67


>ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|222859096|gb|EEE96643.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = +2

Query: 137 MDLDNIECVSSSDGMEEDEIHNPSL----LSQFAASSKSSHHNAQINVINSNSPNRIGLH 304
           MD DNIECVSSSDG++EDEIH+ +L    L QF AS K  + N   N I +       + 
Sbjct: 1   MDFDNIECVSSSDGLDEDEIHHHNLQHHHLHQF-ASPKPHNVNNNSNGIANVVGGPTVIA 59

Query: 305 PSTSVHELLECPVCT 349
           P+TSVHELLECPVCT
Sbjct: 60  PATSVHELLECPVCT 74


>ref|XP_003602252.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|355491300|gb|AES72503.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 216

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/71 (56%), Positives = 49/71 (69%)
 Frame = +2

Query: 137 MDLDNIECVSSSDGMEEDEIHNPSLLSQFAASSKSSHHNAQINVINSNSPNRIGLHPSTS 316
           M+LD+IECVSSSDGM+EDEIH+        +S+K+ +  A IN  N   P  I   P+TS
Sbjct: 1   MELDSIECVSSSDGMDEDEIHSHHHHHSEFSSTKARNGGANIN--NILGPTAIA--PATS 56

Query: 317 VHELLECPVCT 349
           VHELLECPVCT
Sbjct: 57  VHELLECPVCT 67


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