BLASTX nr result
ID: Lithospermum22_contig00024633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00024633
(1685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 641 0.0
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 641 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 640 0.0
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 638 e-180
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 635 e-180
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 641 bits (1654), Expect = 0.0
Identities = 308/371 (83%), Positives = 339/371 (91%)
Frame = +3
Query: 6 GVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSP 185
GV+KLS EGRI FTE+H+D+IFDS+D+PLEG+RWWLNAEDPFQCLAVC NL+EA+RS SP
Sbjct: 650 GVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSP 709
Query: 186 ETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRD 365
ET++SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL+IMKRD
Sbjct: 710 ETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRD 769
Query: 366 AQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADES 545
AQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIAD+S
Sbjct: 770 AQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDS 829
Query: 546 ELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYR 725
ELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAKIIASENEPVRWTTPLGLPVVQPYR
Sbjct: 830 ELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYR 889
Query: 726 QIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFA 905
+I R L++TSLQILTL RET+KVMVKRQRTAFPPNF+HSLDG HMMMTA+AC++AG+NFA
Sbjct: 890 KIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFA 949
Query: 906 GVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXXERGDFDL 1085
GVHDSYWTHACDVD+LNRILREKFVELYE P+LE LLE FQ ERGDFD+
Sbjct: 950 GVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDM 1009
Query: 1086 NDVLTSTYFFN 1118
DVL S YFFN
Sbjct: 1010 RDVLESPYFFN 1020
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 641 bits (1653), Expect = 0.0
Identities = 309/371 (83%), Positives = 339/371 (91%)
Frame = +3
Query: 6 GVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSP 185
GV+KLS EGRIAFTE+H+D+IFDS D+PLEG+RWWLNAEDPFQCLAVC NL+EA+RS SP
Sbjct: 651 GVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSP 710
Query: 186 ETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRD 365
ET+ISHIP+HQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA RVL+IMKRD
Sbjct: 711 ETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRD 770
Query: 366 AQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADES 545
AQ+DPA FPDA+RAR L+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIAD+S
Sbjct: 771 AQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDS 830
Query: 546 ELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYR 725
ELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAKIIASENEPVRWTTPLGLPVVQPYR
Sbjct: 831 ELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYR 890
Query: 726 QIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFA 905
+I R L++TSLQILTL +ET+KVMVKRQRTAFPPNF+HSLDG HMMMTA+AC++AG+NFA
Sbjct: 891 KIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFA 950
Query: 906 GVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXXERGDFDL 1085
GVHDSYWTHACDVD+LNRILREKFVELYETP+LE LLE FQ ERGDFDL
Sbjct: 951 GVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDL 1010
Query: 1086 NDVLTSTYFFN 1118
DVL S YFFN
Sbjct: 1011 RDVLESPYFFN 1021
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 640 bits (1651), Expect = 0.0
Identities = 307/371 (82%), Positives = 339/371 (91%)
Frame = +3
Query: 6 GVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSP 185
GVDKLS EGRI FTE+HLD+IFDS DRPLEG+RWWLNAEDPFQ LA C NL+EALRS SP
Sbjct: 665 GVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSP 724
Query: 186 ETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRD 365
ETTISHIP+HQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIA RVL+IMKRD
Sbjct: 725 ETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRD 784
Query: 366 AQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADES 545
A+KDPA+FPDALRAR+LIN VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+AIAD+
Sbjct: 785 AEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDV 844
Query: 546 ELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYR 725
ELFGA+CYAAKITLTALGEMF+AAR IM+WLG+CAKIIASEN+PVRWTTPLGLPVVQPYR
Sbjct: 845 ELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYR 904
Query: 726 QIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFA 905
++ R L++TSLQ+LTL RET+ +MVKRQRTAFPPNFVHSLDG HMMMTA+ACKKAG+NFA
Sbjct: 905 KLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFA 964
Query: 906 GVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXXERGDFDL 1085
GVHDSYWTHACDVDE+NR+LREKFV+LYETP+LENLLE FQ+ ERGDFDL
Sbjct: 965 GVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDL 1024
Query: 1086 NDVLTSTYFFN 1118
+VL S YFFN
Sbjct: 1025 REVLESPYFFN 1035
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 638 bits (1646), Expect = e-180
Identities = 306/371 (82%), Positives = 338/371 (91%)
Frame = +3
Query: 6 GVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSP 185
GV+KLS EGRI FTE+H+D+IFDS+D+PLEG+RWWLNAEDPFQCLAVC NL+EA+RS SP
Sbjct: 650 GVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSP 709
Query: 186 ETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRD 365
ET++SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA+ YSGIA RVL+IMKRD
Sbjct: 710 ETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRD 769
Query: 366 AQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADES 545
AQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIAD+S
Sbjct: 770 AQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDS 829
Query: 546 ELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYR 725
ELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAKIIASENEPVRWTTPLGLPVVQPYR
Sbjct: 830 ELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYR 889
Query: 726 QIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFA 905
+I R L++TSLQILTL RET+KVMVKRQRTAFPPNF+HSLDG HMMMTA+AC++AG+NFA
Sbjct: 890 KIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFA 949
Query: 906 GVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXXERGDFDL 1085
GVHDSYWTHACDVD+LNRILREKFVELYE P+LE LLE FQ ERGDFD+
Sbjct: 950 GVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDM 1009
Query: 1086 NDVLTSTYFFN 1118
DVL S YFFN
Sbjct: 1010 RDVLESPYFFN 1020
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 589
Score = 635 bits (1639), Expect = e-180
Identities = 308/371 (83%), Positives = 336/371 (90%)
Frame = +3
Query: 6 GVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSP 185
GVDKLS +GRIAFTE+HLD+IFDS DRPLEG+RWWLNAEDPFQCLAVC +LTEALRS SP
Sbjct: 219 GVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRSSSP 278
Query: 186 ETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRD 365
ET ISH+PIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL+IM++D
Sbjct: 279 ETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIMRKD 338
Query: 366 AQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADES 545
AQKDP VFPDAL A++LI+ VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER IAD++
Sbjct: 339 AQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADDT 398
Query: 546 ELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYR 725
E+F ASCYAAK+TLTALGEMFEAAR IM+WLGECAKIIASENEPVRWTTPLGLPVVQPYR
Sbjct: 399 EIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQPYR 458
Query: 726 QIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFA 905
R L++TSLQ+LTL +ET+KVMVKRQRTAFPPNFVHSLDG HMMMTA+ CK+AG+NFA
Sbjct: 459 NFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVTCKRAGLNFA 518
Query: 906 GVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXXERGDFDL 1085
GVHDSYWTHACDVD++NRILREKFVELYETPVLENLLE FQ+ ERGDFDL
Sbjct: 519 GVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGDFDL 578
Query: 1086 NDVLTSTYFFN 1118
DVL S YFFN
Sbjct: 579 QDVLKSPYFFN 589