BLASTX nr result

ID: Lithospermum22_contig00024628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024628
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|2...   347   4e-93
ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vi...   335   1e-89
ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus ...   333   5e-89
ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cuc...   329   7e-88
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub...   327   4e-87

>ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|222855927|gb|EEE93474.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  347 bits (889), Expect = 4e-93
 Identities = 166/224 (74%), Positives = 192/224 (85%)
 Frame = -1

Query: 890 EEADIDRLPIDLLAHMFTLITCFKDLAQASSVCRKWRQGVRESLARKEKLSFAGWKMDDE 711
           EEA+IDRLPIDL+A++F  I  F DLAQASSVCRKW++GV++SLA++  +SFAGWKMDD 
Sbjct: 4   EEAEIDRLPIDLVAYIFGFIVSFTDLAQASSVCRKWKEGVKQSLAQRNSMSFAGWKMDDV 63

Query: 710 STSRLVRLAYNLKELDISRSRWGCQITDHGLYQMSMAKCVSNLSSISLWGTTGITDNGVI 531
           ST+RLVRLAYNLKELDISRSRW CQITD+GLYQ+S+A C+ NL+SISLWG   ITD GV+
Sbjct: 64  STTRLVRLAYNLKELDISRSRWDCQITDNGLYQISLANCIGNLTSISLWGMARITDRGVV 123

Query: 530 HLISRATSLQHLNIGGTFVTDSTLFAIADSCPHLKNIVLWGCRHVTEDGLLVLVNKCHKL 351
            LISRA SLQHLNIGGTFVTD +LFAIADSCP LK+IVLW CRHVTE GLL L NKC KL
Sbjct: 124 QLISRANSLQHLNIGGTFVTDESLFAIADSCPRLKSIVLWSCRHVTEIGLLNLANKCRKL 183

Query: 350 ESINVWGMRVPLNCFISLLTISPALKIQPKGMFSDVGGVHIAPV 219
           ESINVWG RVP+NCFI LLTISP+L+I+P G+  +VGG  I PV
Sbjct: 184 ESINVWGTRVPVNCFIDLLTISPSLQIKPPGVLLNVGGAAILPV 227


>ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vinifera]
           gi|296082395|emb|CBI21400.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  335 bits (859), Expect = 1e-89
 Identities = 159/231 (68%), Positives = 198/231 (85%)
 Frame = -1

Query: 911 MRGGGKVEEADIDRLPIDLLAHMFTLITCFKDLAQASSVCRKWRQGVRESLARKEKLSFA 732
           M G  + EEA+I+RLP+DLLA++F ++T F DLAQASSVCRKW+QGV++SL R+E LSFA
Sbjct: 1   MAGREEGEEAEIERLPMDLLANIFVMLTSFTDLAQASSVCRKWKQGVKQSLGRRESLSFA 60

Query: 731 GWKMDDESTSRLVRLAYNLKELDISRSRWGCQITDHGLYQMSMAKCVSNLSSISLWGTTG 552
           GW+MDD+S +RL+R AY LKELDISRSRWGCQ+TD+GLY++S+AKCV+ L+SISLWG TG
Sbjct: 61  GWQMDDDSIARLLRHAYGLKELDISRSRWGCQVTDNGLYKISLAKCVNKLTSISLWGVTG 120

Query: 551 ITDNGVIHLISRATSLQHLNIGGTFVTDSTLFAIADSCPHLKNIVLWGCRHVTEDGLLVL 372
           ITD+GV+ LISRA SLQHLNIGGTF+TD +LFAIA+SCP LK IVLW CRHVTE+GLLVL
Sbjct: 121 ITDSGVVQLISRAISLQHLNIGGTFITDESLFAIAESCPCLKTIVLWSCRHVTENGLLVL 180

Query: 371 VNKCHKLESINVWGMRVPLNCFISLLTISPALKIQPKGMFSDVGGVHIAPV 219
           V+KC KL+SINVWG RVP++CF +LL I PAL+I+P  +  +V  V + PV
Sbjct: 181 VSKCRKLQSINVWGTRVPVDCFFALLAIRPALQIKPGRLLLNVERVSMWPV 231


>ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537183|gb|EEF38816.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 227

 Score =  333 bits (854), Expect = 5e-89
 Identities = 156/224 (69%), Positives = 187/224 (83%)
 Frame = -1

Query: 890 EEADIDRLPIDLLAHMFTLITCFKDLAQASSVCRKWRQGVRESLARKEKLSFAGWKMDDE 711
           E  +IDRLPIDLLAH+F LI  F DLA ASSVCRKW++GV+ SL R+  LSFAG KMDD 
Sbjct: 3   EGTEIDRLPIDLLAHIFVLINSFTDLAHASSVCRKWKEGVKRSLGRRNSLSFAGLKMDDH 62

Query: 710 STSRLVRLAYNLKELDISRSRWGCQITDHGLYQMSMAKCVSNLSSISLWGTTGITDNGVI 531
           ST+R+VR AY+LKELDISRSRWGCQITD+GLY++S+AKC+SNL+SISLWG TGITD GV+
Sbjct: 63  STARVVRYAYSLKELDISRSRWGCQITDNGLYEISLAKCISNLTSISLWGMTGITDKGVV 122

Query: 530 HLISRATSLQHLNIGGTFVTDSTLFAIADSCPHLKNIVLWGCRHVTEDGLLVLVNKCHKL 351
            L+SRA SLQHLN+GGTF+TD +L AIADSCPHLK+I LW CRHVTE GL+ LVNKC KL
Sbjct: 123 QLMSRANSLQHLNVGGTFITDESLCAIADSCPHLKSIGLWSCRHVTEIGLIYLVNKCRKL 182

Query: 350 ESINVWGMRVPLNCFISLLTISPALKIQPKGMFSDVGGVHIAPV 219
           ESIN WG RVP++CF+ LLT+SPAL+I+  G   ++G   + PV
Sbjct: 183 ESINAWGTRVPIDCFLCLLTVSPALRIKHGGFLLNIGNASMLPV 226


>ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cucumis sativus]
           gi|449508293|ref|XP_004163274.1| PREDICTED: F-box
           protein At5g67140-like [Cucumis sativus]
          Length = 235

 Score =  329 bits (844), Expect = 7e-88
 Identities = 153/218 (70%), Positives = 186/218 (85%)
 Frame = -1

Query: 887 EADIDRLPIDLLAHMFTLITCFKDLAQASSVCRKWRQGVRESLARKEKLSFAGWKMDDES 708
           E +IDRLPIDLLAH+F +IT F DLAQA  VCRKW++GV+ SL R++ LSFAGWKMDD S
Sbjct: 17  EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNS 76

Query: 707 TSRLVRLAYNLKELDISRSRWGCQITDHGLYQMSMAKCVSNLSSISLWGTTGITDNGVIH 528
           T+RL+R AY+L+ELDISRSRWGC ITDHGLY++S+AKC+ NL SISLWG  GITD GV+ 
Sbjct: 77  TARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISLWGMAGITDKGVVQ 136

Query: 527 LISRATSLQHLNIGGTFVTDSTLFAIADSCPHLKNIVLWGCRHVTEDGLLVLVNKCHKLE 348
           LISRA SLQ+LNIGGTFVTD +L+AIADSCP+LK IVLW CRHVTE GLL+LV+KC KLE
Sbjct: 137 LISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLE 196

Query: 347 SINVWGMRVPLNCFISLLTISPALKIQPKGMFSDVGGV 234
           SINVWGMRVP++CFI L+ ISP+L+I+ + + + +  V
Sbjct: 197 SINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSV 234


>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310860|gb|EFH41284.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  327 bits (838), Expect = 4e-87
 Identities = 154/209 (73%), Positives = 184/209 (88%)
 Frame = -1

Query: 890 EEADIDRLPIDLLAHMFTLITCFKDLAQASSVCRKWRQGVRESLARKEKLSFAGWKMDDE 711
           EEA IDRLP+DLLA++F+L+T F  L QAS VC+KWR+ V +S+AR+E LSFAGWKMDD+
Sbjct: 3   EEAAIDRLPLDLLAYIFSLVTSFTVLGQASGVCKKWRKAVNQSMARRESLSFAGWKMDDD 62

Query: 710 STSRLVRLAYNLKELDISRSRWGCQITDHGLYQMSMAKCVSNLSSISLWGTTGITDNGVI 531
           STSRLV LAYNLKELDISRSRWGC ITD+GLYQ++ A+CVSNL+S+SLWG T ITD+GV+
Sbjct: 63  STSRLVHLAYNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSGVV 122

Query: 530 HLISRATSLQHLNIGGTFVTDSTLFAIADSCPHLKNIVLWGCRHVTEDGLLVLVNKCHKL 351
            LISR +SLQHLNIGGTF+TD +LFAIA+ C HLK I +W CRHVTE GLLVLVNKC KL
Sbjct: 123 QLISRTSSLQHLNIGGTFITDESLFAIAERCHHLKTIGMWCCRHVTERGLLVLVNKCGKL 182

Query: 350 ESINVWGMRVPLNCFISLLTISPALKIQP 264
           ESIN+WG RVP++CFI+LLTISPAL+I+P
Sbjct: 183 ESINLWGTRVPVDCFIALLTISPALQIKP 211


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