BLASTX nr result
ID: Lithospermum22_contig00024581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00024581
(2246 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat... 655 0.0
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera] 650 0.0
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,... 572 e-160
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2... 566 e-158
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat... 549 e-153
>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product
[Vitis vinifera]
Length = 854
Score = 655 bits (1691), Expect = 0.0
Identities = 326/573 (56%), Positives = 427/573 (74%)
Frame = +2
Query: 2 GEVDKAYELIEKMENQKSYGCLSEKTCCVLIHGFVKEGRVDRALQLLDKMHRLGYNADIS 181
GEVDKA+ELIE+ME+ L+EKT CVLIHGFV++ RVD+ALQL KM + G+ D+S
Sbjct: 282 GEVDKAFELIERMEDLGIR--LNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVS 339
Query: 182 IYDVLIDELCSIKQFEKALLLFWEMIELGIQPDMKILTKLVSCVPEDDDIIPLLKSWKGD 361
+YD LI LC+ K+ EKAL L EM ELGI PD++IL+KL++ E+ DI L++ D
Sbjct: 340 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLED 399
Query: 362 LTNKNRTLLFNSVLKGLIGRSSIDKAYELLRAALADGFQDDNERTKIIGNGKIVVPDTTS 541
L + LL+NSVL GL+ S+DKAY LLRA D + D+ E K ++V PDTTS
Sbjct: 400 LDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTS 459
Query: 542 FETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLLNEMK 721
F +I GLC KLDLAL LFRDM +GCK++VLLYNN+ID LS+S+R+ CY LL EMK
Sbjct: 460 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMK 519
Query: 722 NSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTLLVRKLCKHRRAI 901
SGF+PT+FTHNSIFG LCR EDV GA++M+R MR GH+PWIK+YTLLV++LCK +R+
Sbjct: 520 GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSA 579
Query: 902 EACNFISAMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVII 1081
EACNF++ M EGFLPDIVA++ A+DG I ++AL++FRD+C+ GYCPDVVAYN +I
Sbjct: 580 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 639
Query: 1082 KGLCKEKRLLESHDLLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKMFEEKRE 1261
G CK KR+ E+HD+L+EM+ KGLVPSVVTYNLLIDGWCK GDID+A CLS+M ++RE
Sbjct: 640 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 699
Query: 1262 PNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILY 1441
PNVI+Y+TLIDG C++GRP +A++LW EM+ KGC PNRI+++ALI+GLCKC D A+LY
Sbjct: 700 PNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLY 759
Query: 1442 LGEMEMKDMIPDPFIYVAIIDTSLSHSDPVLALNVLKKMVQTKTFPDPNDKNHGILKYSV 1621
EM ++ PD +YVA+I + +S+ +P LA +LK+MV FPDP DKN L+ ++
Sbjct: 760 FREMGERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKNDLPLRDAI 818
Query: 1622 MVLYKDPRTSSDVKNLIDKGGLPTHFCASAEGN 1720
+ L +D TSS+VKNLI +G +PT C S G+
Sbjct: 819 LELAEDASTSSNVKNLIAEGRIPTIVCLSDVGS 851
Score = 125 bits (315), Expect = 4e-26
Identities = 120/503 (23%), Positives = 199/503 (39%), Gaps = 105/503 (20%)
Frame = +2
Query: 389 FNSVLKGLIGRSSIDKAYELLRAALADGFQDD------------NER---------TKII 505
FN +L+ + SID L+ G++ D N R +I
Sbjct: 202 FNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIY 261
Query: 506 GNGKIVVPDTTSFETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDR 685
G G + D ++ + ++D A +L M+ +G + + + +I R
Sbjct: 262 GRGWV---DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSR 318
Query: 686 VSYCYTLLNEMKNSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTL 865
V L +M+ SGF P ++++ G LC +++E A+++L M+ G P I+ +
Sbjct: 319 VDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSK 378
Query: 866 LVR---------KLCKHR---------------------------------RAIEACNFI 919
L+ +L + R RA+ N+
Sbjct: 379 LIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYT 438
Query: 920 S-------AMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVI 1078
M E PD + +I +DGL G+ + AL LFRD+ G +V+ YN +
Sbjct: 439 DNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNL 498
Query: 1079 IKGLCKEKRLLESHDLLNEMLNKGLVPSVVTYN--------------------------- 1177
I L RL E + LL EM G P+ T+N
Sbjct: 499 IDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGH 558
Query: 1178 --------LLIDGWCKYGDIDKATKCLSKMFEEKREPNVISYSTLIDGFCDSGRPVEALN 1333
LL+ CK +A L++M E P++++YS IDGF +AL
Sbjct: 559 EPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALE 618
Query: 1334 LWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILYLGEMEMKDMIPDPFIYVAIIDTSL 1513
++ ++ +G P+ +AY LING CK +++ EA L EM K ++P Y +ID
Sbjct: 619 IFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWC 678
Query: 1514 SHSDPVLALNVLKKMVQTKTFPD 1582
+ D A + L +MV + P+
Sbjct: 679 KNGDIDQAFHCLSRMVGKEREPN 701
Score = 112 bits (279), Expect = 6e-22
Identities = 88/362 (24%), Positives = 154/362 (42%), Gaps = 51/362 (14%)
Frame = +2
Query: 626 CKRSVLLYNNIIDCLSHSDRVSYCYTLLNEMKNSGFQPTEFTHNSIFGYLCRHEDVEGAM 805
C + +N +++ +S S + L EM +SG++P ++T S+ C + A+
Sbjct: 195 CVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKAL 254
Query: 806 NMLRAMRTQGHKPWIKYYTL--LVRKLCKHRRAIEACNFISAMAHEGFLPDIVAHTIALD 979
++ + +G W+ + L LV K +A I M G + + +
Sbjct: 255 SVFNEIYGRG---WVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIH 311
Query: 980 GLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVIIKGLCKEKRLLESHDLLNEMLNKGLVP 1159
G +KAL+LF+ + SG+ PDV Y+ +I GLC +K + ++ LL+EM G+ P
Sbjct: 312 GFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 371
Query: 1160 SV---------------------------------VTYNLLIDGWCKYGDIDKATKCLSK 1240
+ + YN +++G +DKA L
Sbjct: 372 DIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRA 431
Query: 1241 ----------------MFEEKREPNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPN 1372
M +E P+ S+S +IDG C++G+ AL+L+ +M GC N
Sbjct: 432 MTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQN 491
Query: 1373 RIAYMALINGLCKCRKLDEAILYLGEMEMKDMIPDPFIYVAIIDTSLSHSDPVLALNVLK 1552
+ Y LI+ L +L+E L L EM+ P F + +I D AL++++
Sbjct: 492 VLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVR 551
Query: 1553 KM 1558
+M
Sbjct: 552 EM 553
>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 650 bits (1676), Expect = 0.0
Identities = 324/573 (56%), Positives = 424/573 (73%)
Frame = +2
Query: 2 GEVDKAYELIEKMENQKSYGCLSEKTCCVLIHGFVKEGRVDRALQLLDKMHRLGYNADIS 181
GEVDKA+ELIE+ME+ L+EKT CVLIHGFV++ RVD+ALQL KM + G+ D+S
Sbjct: 242 GEVDKAFELIERMEDLGIR--LNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVS 299
Query: 182 IYDVLIDELCSIKQFEKALLLFWEMIELGIQPDMKILTKLVSCVPEDDDIIPLLKSWKGD 361
+YD LI LC+ K+ EKAL L EM ELGI PD++IL+KL+ E+ DI L++ D
Sbjct: 300 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLED 359
Query: 362 LTNKNRTLLFNSVLKGLIGRSSIDKAYELLRAALADGFQDDNERTKIIGNGKIVVPDTTS 541
L + LL+NSVL GL+ S+DKAY LL A D + D+ E K ++V P TTS
Sbjct: 360 LDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTS 419
Query: 542 FETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLLNEMK 721
F +I GLC KLDLAL LFRDM +GCK++VLLYNN+ID LS+S+R+ CY LL EMK
Sbjct: 420 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMK 479
Query: 722 NSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTLLVRKLCKHRRAI 901
SGF+PT+FTHNSIFG LCR EDV GA++M+R MR GH+PWIK+YTLLV++LCK +R+
Sbjct: 480 GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSA 539
Query: 902 EACNFISAMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVII 1081
EACNF++ M EGFLPDIVA++ A+DG I ++AL++FRD+C+ GYCPDVVAYN +I
Sbjct: 540 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 599
Query: 1082 KGLCKEKRLLESHDLLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKMFEEKRE 1261
G CK KR+ E+HD+L+EM+ KGLVPSVVTYNLLIDGWCK GDID+A CLS+M ++RE
Sbjct: 600 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 659
Query: 1262 PNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILY 1441
PNVI+Y+TLIDG C++GRP +A++LW EM+ KGC PNRI+++ALI+GLCKC D A+LY
Sbjct: 660 PNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLY 719
Query: 1442 LGEMEMKDMIPDPFIYVAIIDTSLSHSDPVLALNVLKKMVQTKTFPDPNDKNHGILKYSV 1621
EM ++ PD +YVA+I + +S+ +P LA +LK+MV FPDP DKN L+ ++
Sbjct: 720 FREMGERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKNDLPLRDAI 778
Query: 1622 MVLYKDPRTSSDVKNLIDKGGLPTHFCASAEGN 1720
+ L +D TSS+VKNLI +G +PT C S G+
Sbjct: 779 LELAEDASTSSNVKNLIAEGRIPTIVCLSDVGS 811
Score = 122 bits (306), Expect = 4e-25
Identities = 128/572 (22%), Positives = 220/572 (38%), Gaps = 106/572 (18%)
Frame = +2
Query: 185 YDVLIDELCSIKQFEKALLLF-WEMIELGIQPDMKILTKLVSCVPEDDDIIPLLKSWKGD 361
++V+ + L +K ++ A F W + G + + SC+ PL D
Sbjct: 95 HEVVENVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPL-SLLSMD 153
Query: 362 LTNKNRTLLFNSVLKGLIGRSSIDKAYELLRAALADGFQDD------------NER---- 493
+ N +R + L + SID L+ G++ D N R
Sbjct: 154 IVN-SRCAMSPGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDK 212
Query: 494 -----TKIIGNGKIVVPDTTSFETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNI 658
+I G G + D ++ + ++D A +L M+ +G + + + +
Sbjct: 213 ALSVFNEIYGRGWV---DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVL 269
Query: 659 IDCLSHSDRVSYCYTLLNEMKNSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGH 838
I RV L +M+ SGF P ++++ G LC +++E A+++L M+ G
Sbjct: 270 IHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGI 329
Query: 839 KPWIK---------------------------------YYTLLVRKLCKHRRAIEACNFI 919
P I+ Y ++ L + +A +
Sbjct: 330 DPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLL 389
Query: 920 SAMAHEGFL----------------PDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYC 1051
AM + + P + +I +DGL G+ + AL LFRD+ G
Sbjct: 390 XAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCK 449
Query: 1052 PDVVAYNVIIKGLCKEKRLLESHDLLNEMLNKGLVPSVVTYN------------------ 1177
+V+ YN +I L RL E + LL EM G P+ T+N
Sbjct: 450 QNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDM 509
Query: 1178 -----------------LLIDGWCKYGDIDKATKCLSKMFEEKREPNVISYSTLIDGFCD 1306
LL+ CK +A L++M E P++++YS IDGF
Sbjct: 510 VREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVK 569
Query: 1307 SGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILYLGEMEMKDMIPDPFI 1486
+AL ++ ++ +G P+ +AY LING CK +++ EA L EM K ++P
Sbjct: 570 IKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 629
Query: 1487 YVAIIDTSLSHSDPVLALNVLKKMVQTKTFPD 1582
Y +ID + D A + L +MV + P+
Sbjct: 630 YNLLIDGWCKNGDIDQAFHCLSRMVGKEREPN 661
>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 634
Score = 572 bits (1473), Expect = e-160
Identities = 290/582 (49%), Positives = 411/582 (70%)
Frame = +2
Query: 2 GEVDKAYELIEKMENQKSYGCLSEKTCCVLIHGFVKEGRVDRALQLLDKMHRLGYNADIS 181
G+VDK++E IEKME Q L+EKT C LIHGFVK+ RVD+ +QL KM + G + DIS
Sbjct: 58 GQVDKSFEFIEKMEEQNFR--LNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDIS 115
Query: 182 IYDVLIDELCSIKQFEKALLLFWEMIELGIQPDMKILTKLVSCVPEDDDIIPLLKSWKGD 361
+YDVLI CS K+ +KAL L+ EM L IQPD+ +++KL+S PE+ +I +L+ D
Sbjct: 116 LYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLED 175
Query: 362 LTNKNRTLLFNSVLKGLIGRSSIDKAYELLRAALADGFQDDNERTKIIGNGKIVVPDTTS 541
+ + +TLL NSVL L+ IDKA LLR + +G DD+ + K+ + KI P+T S
Sbjct: 176 MNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNG-DDDDVQYKLFRDEKIR-PNTAS 233
Query: 542 FETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLLNEMK 721
F +I+GL QA KLDLA+ LF+DM IGC R +LLYNN+I+ L +SDR+ Y LL EM+
Sbjct: 234 FSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEME 293
Query: 722 NSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTLLVRKLCKHRRAI 901
SGF+PT+FT NSIFG LC+ +DV GA+++++ MR G +PW+K+YTLLVRKLCKH +A
Sbjct: 294 ESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAA 353
Query: 902 EACNFISAMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVII 1081
EA F++ M EGF P+I+A++ L GL + E ++ALKLF+D+ + G CPDV+AYN+++
Sbjct: 354 EASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILM 413
Query: 1082 KGLCKEKRLLESHDLLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKMFEEKRE 1261
KGL + R E+ +L NEM+ KGL+PSVVTYNLLIDGWCK G ID A CL M ++RE
Sbjct: 414 KGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKERE 473
Query: 1262 PNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILY 1441
PNV +Y+TLIDG C +GRP +A+ LW EM+ +GC PNR+A+M I+GLCKC K + A+++
Sbjct: 474 PNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIH 533
Query: 1442 LGEMEMKDMIPDPFIYVAIIDTSLSHSDPVLALNVLKKMVQTKTFPDPNDKNHGILKYSV 1621
EME ++M PD ++Y++++ ++ S+ +A +LKKMV + FPDP DKN I++ ++
Sbjct: 534 FHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRRNFPDPLDKNCIIIRDAI 593
Query: 1622 MVLYKDPRTSSDVKNLIDKGGLPTHFCASAEGNATDIVHQVI 1747
+ L KD RTSS VK+LI G +PT + S G+ ++ +++
Sbjct: 594 LKLSKDARTSSSVKSLIASGSIPTIY-LSDNGDKGEVRGEIV 634
Score = 88.6 bits (218), Expect = 7e-15
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 49/330 (14%)
Frame = +2
Query: 716 MKNSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYY--TLLVRKLCKH 889
M++ G +++T + C + A+N+ ++ G W+ Y ++LV K
Sbjct: 1 MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHG---WLDAYVFSILVLSFSKW 57
Query: 890 RRAIEACNFISAMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAY 1069
+ ++ FI M + F + + G +K ++LF + G PD+ Y
Sbjct: 58 GQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLY 117
Query: 1070 NVIIKGLCKEKRLLESHDLLNEMLNKGLVPSVVTYNLLIDGWCKYGD------------- 1210
+V+I G C K+L ++ L EM + P + + LI + + G
Sbjct: 118 DVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMN 177
Query: 1211 --------------------IDKATKCLSKMF--------------EEKREPNVISYSTL 1288
IDKA L M +EK PN S+S +
Sbjct: 178 IETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIV 237
Query: 1289 IDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILYLGEMEMKDM 1468
I+G + + A+ L+ +M E GC + + Y LINGLC +L+E+ L EME
Sbjct: 238 INGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGF 297
Query: 1469 IPDPFIYVAIIDTSLSHSDPVLALNVLKKM 1558
P F +I D AL+++KKM
Sbjct: 298 KPTQFTLNSIFGCLCKRQDVSGALDLVKKM 327
>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 566 bits (1458), Expect = e-158
Identities = 285/564 (50%), Positives = 391/564 (69%)
Frame = +2
Query: 2 GEVDKAYELIEKMENQKSYGCLSEKTCCVLIHGFVKEGRVDRALQLLDKMHRLGYNADIS 181
G+VDKA ELIE ME + L++KT C LI+GFVKE RVD+AL L DKM + G+ DIS
Sbjct: 149 GKVDKACELIETMEEKNVR--LNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDIS 206
Query: 182 IYDVLIDELCSIKQFEKALLLFWEMIELGIQPDMKILTKLVSCVPEDDDIIPLLKSWKGD 361
+YDV+I LC K +KAL L+ EM IQPD+KI+TKL+S +++++ + D
Sbjct: 207 LYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHED 266
Query: 362 LTNKNRTLLFNSVLKGLIGRSSIDKAYELLRAALADGFQDDNERTKIIGNGKIVVPDTTS 541
+ K TLL+NSVL L+ S+ KAY LL+A D E K+ +V P++T+
Sbjct: 267 MDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTT 326
Query: 542 FETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLLNEMK 721
F +I+GL + LDLA+ LFRDM IGCK +LLYNN+ID L S+R+ LL EM+
Sbjct: 327 FSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEME 386
Query: 722 NSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTLLVRKLCKHRRAI 901
SG +PT FT+N IFG LCR D+ GA+++L+ MR GH PWIK+ T LV++LCKH + +
Sbjct: 387 ESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEV 446
Query: 902 EACNFISAMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVII 1081
EAC F+ MA EGF PDIVA++ LDGL I E ++ALKLF+D+C+ GYCPDV+AYN++I
Sbjct: 447 EACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILI 506
Query: 1082 KGLCKEKRLLESHDLLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKMFEEKRE 1261
KGLCK +R+ E+ +LL+EM KGLVPS VTYN LIDG CK +++A LS M E++RE
Sbjct: 507 KGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKERE 566
Query: 1262 PNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILY 1441
PNVI+YSTLI+G C++GRP +AL LW EM KGC P+ IAYMA I+GL C + +EA++Y
Sbjct: 567 PNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVY 626
Query: 1442 LGEMEMKDMIPDPFIYVAIIDTSLSHSDPVLALNVLKKMVQTKTFPDPNDKNHGILKYSV 1621
L EME ++M PD ++YV +++ L S+ LA +L++MV FPD +DKNH ++ ++
Sbjct: 627 LREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAI 686
Query: 1622 MVLYKDPRTSSDVKNLIDKGGLPT 1693
+ +D RTSS +KNL+ KG +P+
Sbjct: 687 LKFSEDARTSSSIKNLLAKGSIPS 710
Score = 67.0 bits (162), Expect = 2e-08
Identities = 50/188 (26%), Positives = 94/188 (50%)
Frame = +2
Query: 944 LPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVIIKGLCKEKRLLESHD 1123
L ++++ +I +D L E LK D G+ D +++ C ++ D
Sbjct: 72 LLEVLSKSICIDLL------EMRLKEMHD---HGWGFDKYTLTPVLQVYCNMAEFDKALD 122
Query: 1124 LLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKMFEEKREPNVISYSTLIDGFC 1303
+ NE+ ++G V V +++L+ + K+G +DKA + + M E+ N ++ +LI GF
Sbjct: 123 VFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFV 181
Query: 1304 DSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILYLGEMEMKDMIPDPF 1483
R +AL+L+ +MK+ G P+ Y +I GLC + + +A+ EM+ + PD
Sbjct: 182 KESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVK 241
Query: 1484 IYVAIIDT 1507
I +I +
Sbjct: 242 IVTKLISS 249
>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g08310,
mitochondrial-like [Cucumis sativus]
Length = 849
Score = 549 bits (1415), Expect = e-153
Identities = 285/568 (50%), Positives = 394/568 (69%), Gaps = 4/568 (0%)
Frame = +2
Query: 2 GEVDKAYELIEKMENQKSYGCLSEKTCCVLIHGFVKEGRVDRALQLLDKMHRLGYNADIS 181
GEVD+ + I++ME+Q L+ KT LIHGFVKE R D AL+LL+KM +LG+ D+S
Sbjct: 276 GEVDRTMQFIDRMEDQNLM--LNGKTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVS 333
Query: 182 IYDVLIDELCSIKQFEKALLLFWEMIELGIQPDMKILTKLVSCVPEDDDIIPLLKSWKGD 361
IYDVLI LC + FEKA+ LF++M LGI PD++IL KLV+ PE+ +I LL D
Sbjct: 334 IYDVLIGGLCKKRAFEKAMALFFKMKMLGITPDVQILAKLVASSPEERVVIMLLGERPKD 393
Query: 362 LTNKNRTLLFNSVLKGLIGRSSIDKAYELLRAALADGFQDDNERTKIIGNG-KIVVPDTT 538
+ ++ LFNSVLK L+ ++ LL+ + + + DN I K ++P+T
Sbjct: 394 INDEGMIFLFNSVLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNTA 453
Query: 539 SFETIISGLCQA-NKLD--LALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLL 709
SF +I GL + +KLD AL LF DM +GC+R LLYNN+ID L SDR+ Y LL
Sbjct: 454 SFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLL 513
Query: 710 NEMKNSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTLLVRKLCKH 889
+M+ S QPT FT+NSIFG LCR ED GA+ +LR MR GH+PWIK+ TLLV++LCK+
Sbjct: 514 RDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKN 573
Query: 890 RRAIEACNFISAMAHEGFLPDIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAY 1069
RAIEA NF++ M EGFLPDIV+++ A+DGL I + ++AL+LF+D+C+ G PDVV++
Sbjct: 574 GRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSH 633
Query: 1070 NVIIKGLCKEKRLLESHDLLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKMFE 1249
N++IKG CK ++ E+++ L++M GLVPS V+YNLLI+ WCK GDIDKA CLS+M E
Sbjct: 634 NILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNE 693
Query: 1250 EKREPNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKLDE 1429
E ++P +ISY+TLI+G C+SGRP +A LW EM+EKGC PNRI YMA+++GLCKC K DE
Sbjct: 694 ENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKPDE 753
Query: 1430 AILYLGEMEMKDMIPDPFIYVAIIDTSLSHSDPVLALNVLKKMVQTKTFPDPNDKNHGIL 1609
A++Y ME K+M PD ++ VA+ID +S + +A N+LK+ ++ PDP DKN+ +
Sbjct: 754 ALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPTDKNYVTI 813
Query: 1610 KYSVMVLYKDPRTSSDVKNLIDKGGLPT 1693
K ++ L KD +T +VK LI+KG +PT
Sbjct: 814 KDAIFKLSKDEQTGLEVKALIEKGRIPT 841
Score = 82.8 bits (203), Expect = 4e-13
Identities = 82/376 (21%), Positives = 146/376 (38%), Gaps = 55/376 (14%)
Frame = +2
Query: 596 DLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLLNEMKNSGFQPTEFTHNSIFGYL 775
D R MD C + YN +++ LS ++ + L EMK+ G++ ++T +
Sbjct: 181 DQVRSMDL--CIPNNYSYNCLLEILSKTNSIDSIENRLMEMKDFGWEVDKYTLTPVLMAY 238
Query: 776 CRHEDVEGAMNMLRAMRTQGHKPWIKYY--TLLVRKLCKHRRAIEACNFISAMAHEGFLP 949
C + A+ + M +G W+ Y ++L K FI M + +
Sbjct: 239 CNAGKFDKALIVFNDMHERG---WVDGYVFSILALAFSKWGEVDRTMQFIDRMEDQNLML 295
Query: 950 DIVAHTIALDGLFMIGEPEKALKLFRDLCSSGYCPDVVAYNVIIKGLCKEKRLLESHDLL 1129
+ + G + ALKL + G+ DV Y+V+I GLCK++ ++ L
Sbjct: 296 NGKTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALF 355
Query: 1130 NEMLNKGLVPSV---------------------------------VTYNLLIDGWCKYGD 1210
+M G+ P V +N ++ G
Sbjct: 356 FKMKMLGITPDVQILAKLVASSPEERVVIMLLGERPKDINDEGMIFLFNSVLKFLVNAGK 415
Query: 1211 IDKATKCLSKMFE-----------------EKREPNVISYSTLIDGFCDSGRPVE---AL 1330
++ L M +K PN S++ +I G + ++ AL
Sbjct: 416 VESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQDAAL 475
Query: 1331 NLWVEMKEKGCLPNRIAYMALINGLCKCRKLDEAILYLGEMEMKDMIPDPFIYVAIIDTS 1510
+L+ +M + GC +++ Y LI+ LCK +L E+ L +ME + P F Y +I
Sbjct: 476 SLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCL 535
Query: 1511 LSHSDPVLALNVLKKM 1558
D V A+ +L++M
Sbjct: 536 CRREDTVGAIELLREM 551
Score = 73.9 bits (180), Expect = 2e-10
Identities = 91/431 (21%), Positives = 155/431 (35%), Gaps = 88/431 (20%)
Frame = +2
Query: 530 DTTSFETIISGLCQANKLDLALDLFRDMDHIGCKRSVLLYNNIIDCLSHSDRVSYCYTLL 709
D + ++ C A K D AL +F DM G +++ + S V +
Sbjct: 227 DKYTLTPVLMAYCNAGKFDKALIVFNDMHERGWVDG-YVFSILALAFSKWGEVDRTMQFI 285
Query: 710 NEMKNSGFQPTEFTHNSIFGYLCRHEDVEGAMNMLRAMRTQGHKPWIKYYTLLVRKLCKH 889
+ M++ T ++ + + A+ +L M G + Y +L+ LCK
Sbjct: 286 DRMEDQNLMLNGKTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKK 345
Query: 890 RRAIEACNFISAMAHEGFLPD--IVAHTIALDG-----LFMIGEPEKAL----------K 1018
R +A M G PD I+A +A + ++GE K +
Sbjct: 346 RAFEKAMALFFKMKMLGITPDVQILAKLVASSPEERVVIMLLGERPKDINDEGMIFLFNS 405
Query: 1019 LFRDLCSSG---------------------------------YCPDVVAYNVIIKGL--- 1090
+ + L ++G P+ ++N++I GL
Sbjct: 406 VLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNTASFNIVIHGLLKT 465
Query: 1091 --------------------CKEKRLL---------------ESHDLLNEMLNKGLVPSV 1165
C+ +LL ES+ LL +M L P+
Sbjct: 466 TSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTH 525
Query: 1166 VTYNLLIDGWCKYGDIDKATKCLSKMFEEKREPNVISYSTLIDGFCDSGRPVEALNLWVE 1345
TYN + C+ D A + L +M EP + + L+ C +GR +EA N +
Sbjct: 526 FTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLAD 585
Query: 1346 MKEKGCLPNRIAYMALINGLCKCRKLDEAILYLGEMEMKDMIPDPFIYVAIIDTSLSHSD 1525
M +G LP+ ++Y A ++GL K KLD A+ ++ + PD + +I
Sbjct: 586 MVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGK 645
Query: 1526 PVLALNVLKKM 1558
A N L KM
Sbjct: 646 VNEAYNFLHKM 656
Score = 58.9 bits (141), Expect = 6e-06
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Frame = +2
Query: 992 IGEPEKALKLFRDLCSSGYC-PDVVAYNVIIKGLCK-------EKRLLESHD-------- 1123
+G E+A LF + S C P+ +YN +++ L K E RL+E D
Sbjct: 170 VGLVEEANYLFDQVRSMDLCIPNNYSYNCLLEILSKTNSIDSIENRLMEMKDFGWEVDKY 229
Query: 1124 --------------------LLNEMLNKGLVPSVVTYNLLIDGWCKYGDIDKATKCLSKM 1243
+ N+M +G V V +++L + K+G++D+ + + +M
Sbjct: 230 TLTPVLMAYCNAGKFDKALIVFNDMHERGWVDGYV-FSILALAFSKWGEVDRTMQFIDRM 288
Query: 1244 FEEKREPNVISYSTLIDGFCDSGRPVEALNLWVEMKEKGCLPNRIAYMALINGLCKCRKL 1423
++ N ++ LI GF R AL L +M + G + Y LI GLCK R
Sbjct: 289 EDQNLMLNGKTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAF 348
Query: 1424 DEAILYLGEMEMKDMIPDPFIYVAIIDTS 1510
++A+ +M+M + PD I ++ +S
Sbjct: 349 EKAMALFFKMKMLGITPDVQILAKLVASS 377