BLASTX nr result
ID: Lithospermum22_contig00024569
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00024569 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi... 82 4e-14 ref|NP_197165.1| hydroxyproline-rich glycoprotein family protein... 79 4e-13 ref|XP_002871727.1| hypothetical protein ARALYDRAFT_488521 [Arab... 77 1e-12 ref|XP_002305876.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_004171923.1| PREDICTED: protein TIC 40, chloroplastic-lik... 73 3e-11 >ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera] gi|296089465|emb|CBI39284.3| unnamed protein product [Vitis vinifera] Length = 436 Score = 82.4 bits (202), Expect = 4e-14 Identities = 44/59 (74%), Positives = 49/59 (83%) Frame = -2 Query: 177 SEAFASIFSSGSQETSSAVGVNPQLPVPQSSSNVGSPLFWVGVGVGLSAVFSWVASSLK 1 +E FASI SS SQ TSS VGVNPQ P SSN+GSPLFW+GVGVGLSA+FSWVAS+LK Sbjct: 66 TECFASI-SSSSQGTSS-VGVNPQFSPPPPSSNIGSPLFWIGVGVGLSALFSWVASNLK 122 >ref|NP_197165.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] gi|75309208|sp|Q9FMD5.1|TIC40_ARATH RecName: Full=Protein TIC 40, chloroplastic; AltName: Full=Protein PIGMENT DEFECTIVE EMBRYO 120; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 40; Short=AtTIC40; Flags: Precursor gi|16226313|gb|AAL16131.1|AF428299_1 AT5g16620/MTG13_6 [Arabidopsis thaliana] gi|10176971|dbj|BAB10189.1| translocon Tic40-like protein [Arabidopsis thaliana] gi|20260222|gb|AAM13009.1| translocon Tic40-like protein [Arabidopsis thaliana] gi|30387547|gb|AAP31939.1| At5g16620 [Arabidopsis thaliana] gi|332004935|gb|AED92318.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] Length = 447 Score = 79.0 bits (193), Expect = 4e-13 Identities = 40/68 (58%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = -2 Query: 201 KIVIGRERSEAFASIFSSGSQETSSAVGVNPQLPVPQ-SSSNVGSPLFWVGVGVGLSAVF 25 +IV+ ++RS+AFASIFSS + +++V +P +PVP SSS +GSPLFW+GVGVGLSA+F Sbjct: 64 EIVVVKQRSKAFASIFSSSRDQQTTSVA-SPSVPVPPPSSSTIGSPLFWIGVGVGLSALF 122 Query: 24 SWVASSLK 1 S+V S+LK Sbjct: 123 SYVTSNLK 130 >ref|XP_002871727.1| hypothetical protein ARALYDRAFT_488521 [Arabidopsis lyrata subsp. lyrata] gi|297317564|gb|EFH47986.1| hypothetical protein ARALYDRAFT_488521 [Arabidopsis lyrata subsp. lyrata] Length = 447 Score = 77.4 bits (189), Expect = 1e-12 Identities = 40/68 (58%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Frame = -2 Query: 201 KIVIGRERSEAFASIFSSGSQETSSAVGVNPQLPVPQ-SSSNVGSPLFWVGVGVGLSAVF 25 +IV+ ++RS+AFASIFSS + +++V +P +PVP SSS +GSPLFW+GVGVGLSA+F Sbjct: 64 EIVVVKQRSKAFASIFSSSRDQQTTSVA-SPSVPVPPPSSSTIGSPLFWIGVGVGLSALF 122 Query: 24 SWVASSLK 1 S V S+LK Sbjct: 123 SLVTSNLK 130 >ref|XP_002305876.1| predicted protein [Populus trichocarpa] gi|222848840|gb|EEE86387.1| predicted protein [Populus trichocarpa] Length = 429 Score = 76.6 bits (187), Expect = 2e-12 Identities = 41/63 (65%), Positives = 49/63 (77%) Frame = -2 Query: 189 GRERSEAFASIFSSGSQETSSAVGVNPQLPVPQSSSNVGSPLFWVGVGVGLSAVFSWVAS 10 G+ SE FASI SS ++T+S VGVNPQ PV S +GSPLFWVGVGVGLSA+FSWVA+ Sbjct: 67 GKLGSEYFASISSSSGKQTAS-VGVNPQ-PVSPPPSQIGSPLFWVGVGVGLSAIFSWVAT 124 Query: 9 SLK 1 +K Sbjct: 125 RVK 127 >ref|XP_004171923.1| PREDICTED: protein TIC 40, chloroplastic-like, partial [Cucumis sativus] Length = 304 Score = 72.8 bits (177), Expect = 3e-11 Identities = 37/59 (62%), Positives = 46/59 (77%) Frame = -2 Query: 177 SEAFASIFSSGSQETSSAVGVNPQLPVPQSSSNVGSPLFWVGVGVGLSAVFSWVASSLK 1 +E FA++ SS + SS+VGV P + +P SS VGSPLFWVGVGVGLSA+F+WVAS LK Sbjct: 67 AERFATVSSSTTSNDSSSVGV-PSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVASYLK 124