BLASTX nr result

ID: Lithospermum22_contig00024549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024549
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196495.1| NAC domain containing protein 82 [Arabidopsis t...    58   2e-06
ref|XP_002873395.1| hypothetical protein ARALYDRAFT_487745 [Arab...    57   6e-06

>ref|NP_196495.1| NAC domain containing protein 82 [Arabidopsis thaliana]
           gi|145334339|ref|NP_001078551.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
           gi|145334341|ref|NP_001078552.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
           gi|238481224|ref|NP_001154700.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
           gi|9955520|emb|CAC05459.1| putative protein [Arabidopsis
           thaliana] gi|56236056|gb|AAV84484.1| At5g09330
           [Arabidopsis thaliana] gi|222423870|dbj|BAH19899.1|
           AT5G09330 [Arabidopsis thaliana]
           gi|332003992|gb|AED91375.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
           gi|332003993|gb|AED91376.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
           gi|332003994|gb|AED91377.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
           gi|332003995|gb|AED91378.1| NAC domain containing
           protein 82 [Arabidopsis thaliana]
          Length = 489

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
 Frame = +2

Query: 2   KNGPGPRIGAHYGAPFEEEE*DNESPAYLDLPSGDPSAPCVVIHPPE-------TPGSSV 160
           K+GPGPR GA YGAPF+EE+  +E     D+PS   S P  ++ P +        P  S 
Sbjct: 156 KDGPGPRNGAQYGAPFKEEDWSDEE-VRTDVPS--TSNPTNLLEPSKETTLALTAPDDSN 212

Query: 161 LTSMGG------------SEVSSLGPLPEP-----FPSSVHPIDEDITSLAHNDILHFLS 289
               GG            +  ++   LP P      P S  P+ E + +  ++D+   L 
Sbjct: 213 KDCFGGMISESCVSDFLPATTNTTSELPHPSDAATTPMSTAPLAETVQTPNNDDLYSMLD 272

Query: 290 SFTGDASATVQDGISHEMLDXXXXXXXXXXVALLEMDDIFNGLRDLPNWQAIGNQASGSV 469
            F  D     ++ +     +          V  LE + IFNG   LP   ++   AS  +
Sbjct: 273 LFDDD-----EEFLGFNNNEVRYDPGVSAPVC-LEEEGIFNG---LPELSSMPRTASYDL 323

Query: 470 AEIQPYADSFLQLGDLDTPLNPVNNLEQM 556
            E    ++ +L+L DL  PLNP   L+ +
Sbjct: 324 VE---NSELYLELQDLTAPLNPQTGLQDL 349


>ref|XP_002873395.1| hypothetical protein ARALYDRAFT_487745 [Arabidopsis lyrata subsp.
           lyrata] gi|297319232|gb|EFH49654.1| hypothetical protein
           ARALYDRAFT_487745 [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
 Frame = +2

Query: 2   KNGPGPRIGAHYGAPFEEEE*DNESPAYLDLPSGDPSAPCVVIHPPE-------TPGSSV 160
           K+GPGPR GA YGAPF EE+  +E     D+PS   S P  ++ P +        P  S 
Sbjct: 156 KDGPGPRNGAQYGAPFREEDWSDEE-VRTDVPS--TSNPTNLLEPSKETTLALTAPDDSN 212

Query: 161 LTSMGG------------SEVSSLGPLPEP-----FPSSVHPIDEDITSLAHNDILHFLS 289
               GG            +  ++   LP P      P S  P+ E + +  ++D+   L 
Sbjct: 213 KDCFGGMISESCVSDFLPATTNTTSKLPHPSDAANTPMSTAPLAETLQTPNNDDLYSMLD 272

Query: 290 SFTGDAS--ATVQDGISHEMLDXXXXXXXXXXVALLEMDDIFNGLRDLPNWQAIGNQASG 463
            F  D        + + H+                LE + IFNGL +L N   +   AS 
Sbjct: 273 LFDDDEEFLGFNNNEVRHD--------PGVSAPVCLEEEGIFNGLPELSN---MPRTASY 321

Query: 464 SVAEIQPYADSFLQLGDLDTPLNPVNNLEQM 556
            + E    ++ +L+L DL  PLNP   L+ +
Sbjct: 322 DLIE---NSELYLELQDLTAPLNPHIGLQDL 349


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