BLASTX nr result

ID: Lithospermum22_contig00024536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024536
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [...    59   3e-07
gb|ACU19917.1| unknown [Glycine max]                                   59   3e-07
ref|NP_001236274.1| ribosomal protein L2 [Glycine max] gi|120545...    59   3e-07
ref|XP_003623912.1| 60S ribosomal protein L2 [Medicago truncatul...    58   7e-07
gb|AAF85800.1| 60S ribosomal protein L2 [Nicotiana tabacum]            57   2e-06

>ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 260

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 216 TRRIKLPSGSKKIVPSDCRAMIGQVAGGG 302
           T RIKLPSGSKKIVPSDCRAMIGQVAGGG
Sbjct: 145 TSRIKLPSGSKKIVPSDCRAMIGQVAGGG 173


>gb|ACU19917.1| unknown [Glycine max]
          Length = 260

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 216 TRRIKLPSGSKKIVPSDCRAMIGQVAGGG 302
           T RIKLPSGSKKIVPSDCRAMIGQVAGGG
Sbjct: 145 TSRIKLPSGSKKIVPSDCRAMIGQVAGGG 173


>ref|NP_001236274.1| ribosomal protein L2 [Glycine max] gi|12054507|emb|CAC20221.1|
           ribosomal protein L2 [Glycine max]
          Length = 260

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 216 TRRIKLPSGSKKIVPSDCRAMIGQVAGGG 302
           T RIKLPSGSKKIVPSDCRAMIGQVAGGG
Sbjct: 145 TSRIKLPSGSKKIVPSDCRAMIGQVAGGG 173


>ref|XP_003623912.1| 60S ribosomal protein L2 [Medicago truncatula]
           gi|355498927|gb|AES80130.1| 60S ribosomal protein L2
           [Medicago truncatula] gi|388498064|gb|AFK37098.1|
           unknown [Medicago truncatula]
          Length = 259

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 216 TRRIKLPSGSKKIVPSDCRAMIGQVAGGG 302
           T RIKLPSG+KKIVPSDCRAMIGQVAGGG
Sbjct: 145 TSRIKLPSGAKKIVPSDCRAMIGQVAGGG 173


>gb|AAF85800.1| 60S ribosomal protein L2 [Nicotiana tabacum]
          Length = 174

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 216 TRRIKLPSGSKKIVPSDCRAMIGQVAGGG 302
           T RIKLPSGSKKIVPS CRAMIGQVAGGG
Sbjct: 59  TTRIKLPSGSKKIVPSGCRAMIGQVAGGG 87


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