BLASTX nr result

ID: Lithospermum22_contig00024521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024521
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171307.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_002316488.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002515794.1| pentatricopeptide repeat-containing protein,...   138   4e-31
emb|CBI25022.3| unnamed protein product [Vitis vinifera]              137   1e-30

>ref|XP_004171307.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 398

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/85 (76%), Positives = 73/85 (85%)
 Frame = -3

Query: 255 ERDEGREYRSSWHEEREGSRREFRNVLETEPKNWQAVVRAFERINKPSRKEFGLLVNYYG 76
           E D+  EYRS WHEER+ +R   R V+ETEP+NWQAVV AFERI KPSRKE+GL+VNYY 
Sbjct: 263 EGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVVSAFERIKKPSRKEYGLMVNYYA 322

Query: 75  RRGDMHRARETFEKMRARGIEPNSH 1
           RRGDMHRARETFEKMRARGIEP+SH
Sbjct: 323 RRGDMHRARETFEKMRARGIEPSSH 347


>ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/85 (76%), Positives = 73/85 (85%)
 Frame = -3

Query: 255 ERDEGREYRSSWHEEREGSRREFRNVLETEPKNWQAVVRAFERINKPSRKEFGLLVNYYG 76
           E D+  EYRS WHEER+ +R   R V+ETEP+NWQAVV AFERI KPSRKE+GL+VNYY 
Sbjct: 263 EGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVVSAFERIKKPSRKEYGLMVNYYT 322

Query: 75  RRGDMHRARETFEKMRARGIEPNSH 1
           RRGDMHRARETFEKMRARGIEP+SH
Sbjct: 323 RRGDMHRARETFEKMRARGIEPSSH 347


>ref|XP_002316488.1| predicted protein [Populus trichocarpa] gi|222865528|gb|EEF02659.1|
           predicted protein [Populus trichocarpa]
          Length = 941

 Score =  140 bits (354), Expect = 8e-32
 Identities = 61/83 (73%), Positives = 74/83 (89%)
 Frame = -3

Query: 249 DEGREYRSSWHEEREGSRREFRNVLETEPKNWQAVVRAFERINKPSRKEFGLLVNYYGRR 70
           ++G++YRS WHEEREGS + FR VL+T+P+NWQAVV AFERI KPSR+EFGL+V YY RR
Sbjct: 248 EDGKDYRSKWHEEREGSTKAFRKVLDTQPENWQAVVSAFERIKKPSRREFGLMVGYYARR 307

Query: 69  GDMHRARETFEKMRARGIEPNSH 1
           GDMHRAR+TFE MRARGI+P+SH
Sbjct: 308 GDMHRARQTFESMRARGIDPSSH 330


>ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545122|gb|EEF46633.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 924

 Score =  138 bits (348), Expect = 4e-31
 Identities = 61/85 (71%), Positives = 73/85 (85%)
 Frame = -3

Query: 255 ERDEGREYRSSWHEEREGSRREFRNVLETEPKNWQAVVRAFERINKPSRKEFGLLVNYYG 76
           E ++G +Y S WHEER+GSR+ FR VLET+P+NWQ VV AFERI KPSR+E+GL+V+YY 
Sbjct: 258 EGEDGDDYESKWHEERDGSRKAFRRVLETQPENWQDVVSAFERIKKPSRREYGLMVSYYA 317

Query: 75  RRGDMHRARETFEKMRARGIEPNSH 1
           RRGDMHRAR+TFE MRARGIEP SH
Sbjct: 318 RRGDMHRARQTFESMRARGIEPTSH 342


>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/81 (77%), Positives = 69/81 (85%)
 Frame = -3

Query: 243 GREYRSSWHEEREGSRREFRNVLETEPKNWQAVVRAFERINKPSRKEFGLLVNYYGRRGD 64
           G + RS WHEERE SR++FR VLETEP+NWQAVV+AFERI KPSRKEFGL+V YY RRGD
Sbjct: 224 GVDQRSKWHEERESSRKDFRKVLETEPENWQAVVQAFERIKKPSRKEFGLMVTYYARRGD 283

Query: 63  MHRARETFEKMRARGIEPNSH 1
           MH AR TFE MRARGIEP SH
Sbjct: 284 MHHARGTFESMRARGIEPTSH 304


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