BLASTX nr result

ID: Lithospermum22_contig00024514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024514
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511792.1| ring finger protein, putative [Ricinus commu...   102   3e-34
emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]   104   8e-33
ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti...   104   8e-33
ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like...   102   2e-32
ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-30

>ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
           gi|223548972|gb|EEF50461.1| ring finger protein,
           putative [Ricinus communis]
          Length = 201

 Score =  102 bits (255), Expect(2) = 3e-34
 Identities = 44/58 (75%), Positives = 54/58 (93%)
 Frame = +2

Query: 2   VVAAIPTVKFYRESFGSLEDAQCVICLGEYEDKEVLRIMPKCGHTYHLSCIDVWLKRQ 175
           +VAAIPT+KF RE+F ++EDAQC ICLGEY++KEVLRIMPKCGH +HLSCIDVWL++Q
Sbjct: 65  MVAAIPTMKFNREAFTAVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQ 122



 Score = 69.3 bits (168), Expect(2) = 3e-34
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = +1

Query: 241 VWLKRQSTCPVCRLPVHDSSENERVPSANHVSEAQSFDSTEMSVEHSRLWLLPAADQSEV 420
           VWL++QSTCPVCR P+ D+ E + +  A  +S  +S DS E S EHSR WLLP  D+S  
Sbjct: 117 VWLRKQSTCPVCRFPIQDTLEAKHMRQAT-MSMVRSIDSPETSTEHSRQWLLPGPDRSMG 175

Query: 421 HRNNDMPANYVTIEMESGSAEIAP 492
           + +N    + V +   SGS E AP
Sbjct: 176 NASNQ--EHLVPV---SGSPEPAP 194


>emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
          Length = 224

 Score =  104 bits (260), Expect(2) = 8e-33
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = +2

Query: 2   VVAAIPTVKFYRESFGSLEDAQCVICLGEYEDKEVLRIMPKCGHTYHLSCIDVWLKRQ 175
           +VAAIPT+KF RE+F S+EDAQC ICLGEY++KEVLRIMPKCGH +HLSCIDVWL++Q
Sbjct: 87  MVAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQ 144



 Score = 62.4 bits (150), Expect(2) = 8e-33
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +1

Query: 241 VWLKRQSTCPVCRLPVHDSSENERV-PSANHVSEAQSFDSTEMSVEHSRLWLLPAADQSE 417
           VWL++QSTCPVCRL + DS E + V P A     AQS DS E+SV+ S  WLLP  ++S 
Sbjct: 139 VWLRKQSTCPVCRLSLQDSFETKHVRPEA--FDTAQSVDSPEISVDRSHQWLLPGPERSV 196

Query: 418 VHRNNDM 438
            +  N +
Sbjct: 197 ENGTNQV 203


>ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
           gi|296089077|emb|CBI38780.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  104 bits (260), Expect(2) = 8e-33
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = +2

Query: 2   VVAAIPTVKFYRESFGSLEDAQCVICLGEYEDKEVLRIMPKCGHTYHLSCIDVWLKRQ 175
           +VAAIPT+KF RE+F S+EDAQC ICLGEY++KEVLRIMPKCGH +HLSCIDVWL++Q
Sbjct: 64  MVAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQ 121



 Score = 62.4 bits (150), Expect(2) = 8e-33
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +1

Query: 241 VWLKRQSTCPVCRLPVHDSSENERV-PSANHVSEAQSFDSTEMSVEHSRLWLLPAADQSE 417
           VWL++QSTCPVCRL + DS E + V P A     AQS DS E+SV+ S  WLLP  ++S 
Sbjct: 116 VWLRKQSTCPVCRLSLQDSFETKHVRPEA--FDTAQSVDSPEISVDRSHQWLLPGPERSV 173

Query: 418 VHRNNDM 438
            +  N +
Sbjct: 174 ENGTNQV 180


>ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
           gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 203

 Score =  102 bits (254), Expect(2) = 2e-32
 Identities = 43/58 (74%), Positives = 54/58 (93%)
 Frame = +2

Query: 2   VVAAIPTVKFYRESFGSLEDAQCVICLGEYEDKEVLRIMPKCGHTYHLSCIDVWLKRQ 175
           ++AAIPT+ F RE+F S+EDAQC ICLGEYE+KEVLRIMPKCGH++HL+CIDVWL++Q
Sbjct: 67  LIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQ 124



 Score = 63.2 bits (152), Expect(2) = 2e-32
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +1

Query: 241 VWLKRQSTCPVCRLPVHDSSENERVPSANHVSEAQSFDSTEMSVE-HSRLWLLPAADQSE 417
           VWL++QSTCPVCRLP+ DS   +       VS  QSFD +E+S + HS+ WLLP  ++SE
Sbjct: 119 VWLRKQSTCPVCRLPLQDSFRTKPARPMT-VSRDQSFDGSEISTDHHSQHWLLPGPNRSE 177

Query: 418 VHRNN 432
            + +N
Sbjct: 178 GNTSN 182


>ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|222843046|gb|EEE80593.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 96.7 bits (239), Expect(2) = 2e-30
 Identities = 41/58 (70%), Positives = 50/58 (86%)
 Frame = +2

Query: 2   VVAAIPTVKFYRESFGSLEDAQCVICLGEYEDKEVLRIMPKCGHTYHLSCIDVWLKRQ 175
           ++AAIPT++F  E F S EDAQC ICLGEY++KEVLRIMP CGH +HLSCIDVWL++Q
Sbjct: 60  LLAAIPTLRFTHEEFSSAEDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQ 117



 Score = 62.8 bits (151), Expect(2) = 2e-30
 Identities = 35/87 (40%), Positives = 48/87 (55%)
 Frame = +1

Query: 241 VWLKRQSTCPVCRLPVHDSSENERVPSANHVSEAQSFDSTEMSVEHSRLWLLPAADQSEV 420
           VWL++QSTCPVCR P+ DS E + +     +S  QS DS +   E SR WLLP+   S  
Sbjct: 112 VWLRKQSTCPVCRFPIQDSFEAKHM-RQTAISMVQSIDSPDTRSEQSRQWLLPSYQGSAG 170

Query: 421 HRNNDMPANYVTIEMESGSAEIAPARS 501
           + +N+   + V      G+ EI P  S
Sbjct: 171 NHSNERHLDPV-----PGNPEITPGES 192


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