BLASTX nr result

ID: Lithospermum22_contig00024479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024479
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513001.1| 30S ribosomal protein S31, mitochondrial pre...    82   6e-14
ref|XP_002878542.1| hypothetical protein ARALYDRAFT_480991 [Arab...    81   8e-14
ref|NP_565506.1| 30S ribosomal protein S31 [Arabidopsis thaliana...    80   2e-13
ref|XP_002313008.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002306139.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13

>ref|XP_002513001.1| 30S ribosomal protein S31, mitochondrial precursor, putative
           [Ricinus communis] gi|223548012|gb|EEF49504.1| 30S
           ribosomal protein S31, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 87

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/52 (75%), Positives = 40/52 (76%)
 Frame = +1

Query: 88  VCGRGDXXXXXXXXXXXSYGNARGKKEKMIERIKDKVEVPRSTPWPLPFKLI 243
           VCGRGD           SYGN+R KKEKMIERIKDKVEVPRSTPWPLPFKLI
Sbjct: 36  VCGRGDKRTKKGKRFKGSYGNSRPKKEKMIERIKDKVEVPRSTPWPLPFKLI 87


>ref|XP_002878542.1| hypothetical protein ARALYDRAFT_480991 [Arabidopsis lyrata subsp.
           lyrata] gi|297324381|gb|EFH54801.1| hypothetical protein
           ARALYDRAFT_480991 [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = +1

Query: 88  VCGRGDXXXXXXXXXXXSYGNARGKKEKMIERIKDKVEVPRSTPWPLPFKLI 243
           +CGRGD           SYGN+RGKK+KMIERIKDK+EVPRSTPWPLPFKLI
Sbjct: 44  LCGRGDKKTKKGKRFKGSYGNSRGKKQKMIERIKDKLEVPRSTPWPLPFKLI 95


>ref|NP_565506.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75265972|sp|Q9SJU8.1|RT31_ARATH RecName: Full=30S
           ribosomal protein S31, mitochondrial; Flags: Precursor
           gi|11692890|gb|AAG40048.1|AF324697_1 At2g21290
           [Arabidopsis thaliana]
           gi|12642938|gb|AAK00411.1|AF339729_1 unknown protein
           [Arabidopsis thaliana] gi|4567264|gb|AAD23677.1|
           expressed protein [Arabidopsis thaliana]
           gi|18252177|gb|AAL61921.1| unknown protein [Arabidopsis
           thaliana] gi|23197628|gb|AAN15341.1| unknown protein
           [Arabidopsis thaliana] gi|330252062|gb|AEC07156.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
          Length = 98

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/52 (69%), Positives = 41/52 (78%)
 Frame = +1

Query: 88  VCGRGDXXXXXXXXXXXSYGNARGKKEKMIERIKDKVEVPRSTPWPLPFKLI 243
           +CGRGD           SYGN+RGKK+KMIERIKDK+E+PRSTPWPLPFKLI
Sbjct: 47  LCGRGDKKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI 98


>ref|XP_002313008.1| predicted protein [Populus trichocarpa] gi|222849416|gb|EEE86963.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/52 (71%), Positives = 39/52 (75%)
 Frame = +1

Query: 88  VCGRGDXXXXXXXXXXXSYGNARGKKEKMIERIKDKVEVPRSTPWPLPFKLI 243
           +CGRGD           +YGNAR KKEK IERIKDKVEVPRSTPWPLPFKLI
Sbjct: 39  LCGRGDKKTKRGKRFKGTYGNARPKKEKKIERIKDKVEVPRSTPWPLPFKLI 90


>ref|XP_002306139.1| predicted protein [Populus trichocarpa] gi|222849103|gb|EEE86650.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/52 (71%), Positives = 39/52 (75%)
 Frame = +1

Query: 88  VCGRGDXXXXXXXXXXXSYGNARGKKEKMIERIKDKVEVPRSTPWPLPFKLI 243
           +CGRGD           +YGNAR KKEK IERIKDKVEVPRSTPWPLPFKLI
Sbjct: 43  LCGRGDKKTKRGKRFKGTYGNARPKKEKKIERIKDKVEVPRSTPWPLPFKLI 94


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