BLASTX nr result
ID: Lithospermum22_contig00024458
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00024458 (432 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAD43141.1| cyclin D2 [Daucus carota] 87 1e-15 ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223... 85 5e-15 emb|CBI19236.3| unnamed protein product [Vitis vinifera] 83 2e-14 emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera] 83 2e-14 ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max] 79 3e-13 >emb|CAD43141.1| cyclin D2 [Daucus carota] Length = 382 Score = 87.0 bits (214), Expect = 1e-15 Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 13/107 (12%) Frame = +3 Query: 3 GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALSCFKQIEKDRVFKCIEMIH-------- 158 GIDFLEFRP EI+AAVA+ V E + +D +KA+S +EKDRVFKCIEMI Sbjct: 235 GIDFLEFRPSEISAAVAICVTREAQTLDINKAMSNIIPVEKDRVFKCIEMIQDLTLVTET 294 Query: 159 -----XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTNSQES 284 GVL+ AC+S +D TVGSCPNS +++ S Sbjct: 295 SNVASGRTRAQVPQSPVGVLDAACLSYKSDERTVGSCPNSSLHTETS 341 >ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223529757|gb|EEF31696.1| cyclin d, putative [Ricinus communis] Length = 366 Score = 85.1 bits (209), Expect = 5e-15 Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 19/113 (16%) Frame = +3 Query: 6 IDFLEFRPCEIAAAVALSVLGEIEPMDTDKALSCFKQIEKDRVFKCIEMIH--------- 158 IDFLEFRP EIAAAVA+ VLGE++ +D KA+ CF +E++RV KC+E+I Sbjct: 238 IDFLEFRPSEIAAAVAIFVLGEVQAVDVYKAMPCFTHVEEERVLKCVELIKDLSLISGSA 297 Query: 159 ---------XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPN-SYTNSQESE 287 GVLE AC+S +D TVGSC N S+TN+ +++ Sbjct: 298 TTSSGDNVANASASSVPQSPNGVLEAACLSYKSDDTTVGSCANSSHTNTPDTK 350 >emb|CBI19236.3| unnamed protein product [Vitis vinifera] Length = 355 Score = 83.2 bits (204), Expect = 2e-14 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 15/107 (14%) Frame = +3 Query: 3 GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALS-CFKQIEKDRVFKCIEMIH------- 158 GIDFLEFRP EIAAAVA+S+ GE + +D +KA+S + IEK+RV KCIE++H Sbjct: 238 GIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISG 297 Query: 159 -------XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTNSQ 278 GVL+ AC+S +D TVGSC NS N + Sbjct: 298 SVKRSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCANSSHNKK 344 >emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera] Length = 375 Score = 83.2 bits (204), Expect = 2e-14 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 15/107 (14%) Frame = +3 Query: 3 GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALS-CFKQIEKDRVFKCIEMIH------- 158 GIDFLEFRP EIAAAVA+S+ GE + +D +KA+S + IEK+RV KCIE++H Sbjct: 258 GIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISG 317 Query: 159 -------XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTNSQ 278 GVL+ AC+S +D TVGSC NS N + Sbjct: 318 SVKRSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCANSSHNKK 364 >ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max] Length = 361 Score = 79.3 bits (194), Expect = 3e-13 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 11/101 (10%) Frame = +3 Query: 3 GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALSCFKQIEKDRVFKCIEMIH-------- 158 GID+LEFRP EIAAAVA+SVL E++ ++ DKA+ +EK RV KC+E+I Sbjct: 239 GIDYLEFRPSEIAAAVAVSVLKELQAIEIDKAIIDLLVVEKVRVLKCVELIRDLSLINVA 298 Query: 159 ---XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTN 272 GVL+ C+S +D TVGSCPNS N Sbjct: 299 ASLGSKVPYVPQSPIGVLDAGCLSYKSDELTVGSCPNSSHN 339