BLASTX nr result

ID: Lithospermum22_contig00024458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024458
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43141.1| cyclin D2 [Daucus carota]                              87   1e-15
ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223...    85   5e-15
emb|CBI19236.3| unnamed protein product [Vitis vinifera]               83   2e-14
emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]    83   2e-14
ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]          79   3e-13

>emb|CAD43141.1| cyclin D2 [Daucus carota]
          Length = 382

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
 Frame = +3

Query: 3   GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALSCFKQIEKDRVFKCIEMIH-------- 158
           GIDFLEFRP EI+AAVA+ V  E + +D +KA+S    +EKDRVFKCIEMI         
Sbjct: 235 GIDFLEFRPSEISAAVAICVTREAQTLDINKAMSNIIPVEKDRVFKCIEMIQDLTLVTET 294

Query: 159 -----XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTNSQES 284
                            GVL+ AC+S  +D  TVGSCPNS  +++ S
Sbjct: 295 SNVASGRTRAQVPQSPVGVLDAACLSYKSDERTVGSCPNSSLHTETS 341


>ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223529757|gb|EEF31696.1|
           cyclin d, putative [Ricinus communis]
          Length = 366

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 19/113 (16%)
 Frame = +3

Query: 6   IDFLEFRPCEIAAAVALSVLGEIEPMDTDKALSCFKQIEKDRVFKCIEMIH--------- 158
           IDFLEFRP EIAAAVA+ VLGE++ +D  KA+ CF  +E++RV KC+E+I          
Sbjct: 238 IDFLEFRPSEIAAAVAIFVLGEVQAVDVYKAMPCFTHVEEERVLKCVELIKDLSLISGSA 297

Query: 159 ---------XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPN-SYTNSQESE 287
                                GVLE AC+S  +D  TVGSC N S+TN+ +++
Sbjct: 298 TTSSGDNVANASASSVPQSPNGVLEAACLSYKSDDTTVGSCANSSHTNTPDTK 350


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 15/107 (14%)
 Frame = +3

Query: 3   GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALS-CFKQIEKDRVFKCIEMIH------- 158
           GIDFLEFRP EIAAAVA+S+ GE + +D +KA+S   + IEK+RV KCIE++H       
Sbjct: 238 GIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISG 297

Query: 159 -------XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTNSQ 278
                              GVL+ AC+S  +D  TVGSC NS  N +
Sbjct: 298 SVKRSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCANSSHNKK 344


>emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]
          Length = 375

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 15/107 (14%)
 Frame = +3

Query: 3   GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALS-CFKQIEKDRVFKCIEMIH------- 158
           GIDFLEFRP EIAAAVA+S+ GE + +D +KA+S   + IEK+RV KCIE++H       
Sbjct: 258 GIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISG 317

Query: 159 -------XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTNSQ 278
                              GVL+ AC+S  +D  TVGSC NS  N +
Sbjct: 318 SVKRSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCANSSHNKK 364


>ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 361

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
 Frame = +3

Query: 3   GIDFLEFRPCEIAAAVALSVLGEIEPMDTDKALSCFKQIEKDRVFKCIEMIH-------- 158
           GID+LEFRP EIAAAVA+SVL E++ ++ DKA+     +EK RV KC+E+I         
Sbjct: 239 GIDYLEFRPSEIAAAVAVSVLKELQAIEIDKAIIDLLVVEKVRVLKCVELIRDLSLINVA 298

Query: 159 ---XXXXXXXXXXXXGVLEVACMSCTTDAETVGSCPNSYTN 272
                          GVL+  C+S  +D  TVGSCPNS  N
Sbjct: 299 ASLGSKVPYVPQSPIGVLDAGCLSYKSDELTVGSCPNSSHN 339


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