BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024409
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...   276   4e-72
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...   270   3e-70
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   269   8e-70
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              269   8e-70
ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] g...   258   1e-66

>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1229

 Score =  276 bits (707), Expect = 4e-72
 Identities = 140/256 (54%), Positives = 181/256 (70%)
 Frame = +3

Query: 138 MTKSNGRKKKEAMSGVTESTLIDVKNILEQFNASHDDVYTFKAGLTNRDRAAVHKLCRKF 317
           M K   +K ++    V E+T I +  ILEQF A+ D V+TF+A L+NR+RA VH++C+K 
Sbjct: 1   MGKKRQKKAEQGNPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKL 60

Query: 318 GMKSKSSGRGEGRRVSVFXXXXXXXXXXXEERLSSFTFSQRSRAVLQDLFSHYPPDSREV 497
           GMKSKS+GRG  RRVS++           +E L++ TFS+ S+ VLQ+LF++YPP+  E+
Sbjct: 61  GMKSKSTGRGHQRRVSIYKIIQKADTGNGKESLTNLTFSEESKLVLQELFAYYPPEDGEL 120

Query: 498 DDYNSGNSNRTIKTVQVTRDGIFSKAPANKSKIREKVKTAAVTMENSPNLKKITEDRSKL 677
                GN       +Q  +DGIFS     K+ I +KV++    +E   NL++I E RSKL
Sbjct: 121 GAKIVGNCKAKDSIIQGKKDGIFSMPSMAKADITKKVESLNSRIEKDANLRQIVEQRSKL 180

Query: 678 PIASFKDNITSIVESHQVVLISGETGCGKTTQVPQYLLDYMWTKGEACKIVCTQPRRISA 857
           PIASF+D ITS VESHQ+VLISGETGCGKTTQVPQYLL+Y W K EACKI+CTQPRRISA
Sbjct: 181 PIASFRDVITSTVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCEACKIICTQPRRISA 240

Query: 858 ISVAERISTERGETIG 905
           ISVAERIS+ERGE +G
Sbjct: 241 ISVAERISSERGENVG 256


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
           predicted protein [Populus trichocarpa]
          Length = 1195

 Score =  270 bits (690), Expect = 3e-70
 Identities = 147/261 (56%), Positives = 184/261 (70%), Gaps = 5/261 (1%)
 Frame = +3

Query: 138 MTKSNGRKKKEAMSG-VTESTLIDVKNILEQFNASHDDVYTFKAGLTNRDRAAVHKLCRK 314
           M K N RK  +  +  V E+TLI +  ILE+F A+ D VYTF+A L+N DRA VH++C+K
Sbjct: 1   MGKKNQRKAAQQQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKK 60

Query: 315 FGMKSKSSGRGEGRRVSVFXXXXXXXXXXXEERLSSFTFSQRSRAVLQDLFSHYPPDS-- 488
            GMKSKSSGRG  RRVSV+           +E L+  TFS  S+ VL +LFS+YPP+   
Sbjct: 61  MGMKSKSSGRGGQRRVSVYKNTKKLDDVKGKENLTHLTFSGESKMVLGELFSNYPPEEGG 120

Query: 489 --REVDDYNSGNSNRTIKTVQVTRDGIFSKAPANKSKIREKVKTAAVTMENSPNLKKITE 662
              E++  +SG + +T    +  +D IFSK    K++I +KV++ A  +E    LK+I E
Sbjct: 121 FGAELEGKHSGTAGKT----REKKDDIFSKPSRKKAEIAKKVESFASRIEKDVKLKQIVE 176

Query: 663 DRSKLPIASFKDNITSIVESHQVVLISGETGCGKTTQVPQYLLDYMWTKGEACKIVCTQP 842
            RSKLPIASF D ITS +ESHQVVLISGETGCGKTTQVPQ+LLD+MW KGEACKIVCTQP
Sbjct: 177 GRSKLPIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKIVCTQP 236

Query: 843 RRISAISVAERISTERGETIG 905
           RRISAISV+ERIS ERGE +G
Sbjct: 237 RRISAISVSERISYERGENVG 257


>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
           vinifera]
          Length = 1231

 Score =  269 bits (687), Expect = 8e-70
 Identities = 140/259 (54%), Positives = 180/259 (69%), Gaps = 3/259 (1%)
 Frame = +3

Query: 138 MTKSNGRKKKEAMS---GVTESTLIDVKNILEQFNASHDDVYTFKAGLTNRDRAAVHKLC 308
           MT+S  +++K+      GV E T I +   L++F  +H++VYTF+A LTN +RA VH++C
Sbjct: 1   MTRSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVC 60

Query: 309 RKFGMKSKSSGRGEGRRVSVFXXXXXXXXXXXEERLSSFTFSQRSRAVLQDLFSHYPPDS 488
           RK GM SKSSGRG  RRVSV+           EE      FS+ ++ VL DLF+ YPPD 
Sbjct: 61  RKMGMTSKSSGRGSQRRVSVYKTKKKVDTKK-EEGNPYLNFSEEAKEVLLDLFTRYPPDD 119

Query: 489 REVDDYNSGNSNRTIKTVQVTRDGIFSKAPANKSKIREKVKTAAVTMENSPNLKKITEDR 668
           +E+      N +   + +   +D IF +   NK++I +KV+  A  +E  P+L++ITE R
Sbjct: 120 KEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGR 179

Query: 669 SKLPIASFKDNITSIVESHQVVLISGETGCGKTTQVPQYLLDYMWTKGEACKIVCTQPRR 848
           SKLPIASFKD ITS +ESHQVVLISGETGCGKTTQVPQ++LDYMW KGEACKIVCTQPRR
Sbjct: 180 SKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRR 239

Query: 849 ISAISVAERISTERGETIG 905
           ISA SVAERIS E+GE +G
Sbjct: 240 ISATSVAERISFEKGENVG 258


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  269 bits (687), Expect = 8e-70
 Identities = 140/259 (54%), Positives = 180/259 (69%), Gaps = 3/259 (1%)
 Frame = +3

Query: 138 MTKSNGRKKKEAMS---GVTESTLIDVKNILEQFNASHDDVYTFKAGLTNRDRAAVHKLC 308
           MT+S  +++K+      GV E T I +   L++F  +H++VYTF+A LTN +RA VH++C
Sbjct: 1   MTRSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVC 60

Query: 309 RKFGMKSKSSGRGEGRRVSVFXXXXXXXXXXXEERLSSFTFSQRSRAVLQDLFSHYPPDS 488
           RK GM SKSSGRG  RRVSV+           EE      FS+ ++ VL DLF+ YPPD 
Sbjct: 61  RKMGMTSKSSGRGSQRRVSVYKTKKKVDTKK-EEGNPYLNFSEEAKEVLLDLFTRYPPDD 119

Query: 489 REVDDYNSGNSNRTIKTVQVTRDGIFSKAPANKSKIREKVKTAAVTMENSPNLKKITEDR 668
           +E+      N +   + +   +D IF +   NK++I +KV+  A  +E  P+L++ITE R
Sbjct: 120 KEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGR 179

Query: 669 SKLPIASFKDNITSIVESHQVVLISGETGCGKTTQVPQYLLDYMWTKGEACKIVCTQPRR 848
           SKLPIASFKD ITS +ESHQVVLISGETGCGKTTQVPQ++LDYMW KGEACKIVCTQPRR
Sbjct: 180 SKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRR 239

Query: 849 ISAISVAERISTERGETIG 905
           ISA SVAERIS E+GE +G
Sbjct: 240 ISATSVAERISFEKGENVG 258


>ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
           gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA
           helicase [Oryza sativa Japonica Group]
           gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA
           helicase [Oryza sativa Japonica Group]
           gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa
           Japonica Group]
          Length = 1223

 Score =  258 bits (659), Expect = 1e-66
 Identities = 134/242 (55%), Positives = 169/242 (69%)
 Frame = +3

Query: 180 GVTESTLIDVKNILEQFNASHDDVYTFKAGLTNRDRAAVHKLCRKFGMKSKSSGRGEGRR 359
           GV E+TL+ V  +LE F AS   VY F+ G++ ++RAA+H++CRK GM SKSSG GE R 
Sbjct: 42  GVREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNGERRC 101

Query: 360 VSVFXXXXXXXXXXXEERLSSFTFSQRSRAVLQDLFSHYPPDSREVDDYNSGNSNRTIKT 539
           +SV+           EE  S   FS  +R VLQDLF HYPPD  E++ +   NS+     
Sbjct: 102 LSVYKRKQNQGLET-EEGPSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVRNSSDKAVK 160

Query: 540 VQVTRDGIFSKAPANKSKIREKVKTAAVTMENSPNLKKITEDRSKLPIASFKDNITSIVE 719
           +Q   DG F +    K  I +KV+  A  +  S  L+KI +DRSKLPI+S+KD I+S +E
Sbjct: 161 IQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDAISSTLE 220

Query: 720 SHQVVLISGETGCGKTTQVPQYLLDYMWTKGEACKIVCTQPRRISAISVAERISTERGET 899
           +HQVVLISGETGCGKTTQVPQY+LD+MW KGE+CKIVCTQPRRISAISVAERIS ERGE+
Sbjct: 221 NHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQPRRISAISVAERISAERGES 280

Query: 900 IG 905
           +G
Sbjct: 281 VG 282