BLASTX nr result

ID: Lithospermum22_contig00024393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024393
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   174   9e-42
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   174   9e-42
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   169   2e-40
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   169   2e-40

>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/142 (61%), Positives = 105/142 (73%)
 Frame = +2

Query: 2   PGRSPHTVIRTLRTNFAGYLWFLRGDLTHVLCDLDVDVAMGFFQKGVKDWKVLKLIKSGL 181
           PGR+ HTVIRT+R+NFAGYLWFLRGDL+ +L D+D DV MG  +K V+D KVL LIK  L
Sbjct: 152 PGRNAHTVIRTIRSNFAGYLWFLRGDLSEILDDIDADVVMGCVEKVVRDKKVLNLIKKAL 211

Query: 182 RESQGRRASNEGDEEDRSRTVRQRKKARTSKRLLKENEPKPDPYWLRTFFDFAPEEAENV 361
           +     R      EE R    +++K+  T K++L ENEPKPDPYWLRTFFDFAPEEA  +
Sbjct: 212 KSPVRIREMGNYGEESR----KKKKRKSTKKKILNENEPKPDPYWLRTFFDFAPEEAAKI 267

Query: 362 PNYGHIGILSPLLANIYLNELD 427
           P YG+ GILSPLLAN+ LNELD
Sbjct: 268 PTYGYCGILSPLLANVCLNELD 289


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/144 (59%), Positives = 107/144 (74%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   PGRSPHTVIRTLRTNFAGYLWFLRGDLTHVLCDLDVDVAMGFFQKGVKDWKVLKLIKSGL 181
           PGR+ HTVIRT+R+NFAGYLWFL+GDLT +L  +D +V M   +KG +D K+L LIKS L
Sbjct: 187 PGRNAHTVIRTIRSNFAGYLWFLKGDLTEILDRVDPNVVMRSLEKGTRDKKILGLIKSAL 246

Query: 182 RESQGRRASNEGDEEDRSRTVRQRKKAR-TSKRLLKENEPKPDPYWLRTFFDFAPEEAEN 358
            E +  +  +   +E+    +R+ KK R T KR+ KENEP PDPYWLRTFF FAPEEA  
Sbjct: 247 -EGENEKLRDVSRKEENVEELRRLKKRRATKKRIWKENEPIPDPYWLRTFFSFAPEEAAK 305

Query: 359 VPNYGHIGILSPLLANIYLNELDH 430
           +P+YGH GILSPLLAN+ LNELDH
Sbjct: 306 LPDYGHCGILSPLLANVCLNELDH 329


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/142 (59%), Positives = 103/142 (72%)
 Frame = +2

Query: 2   PGRSPHTVIRTLRTNFAGYLWFLRGDLTHVLCDLDVDVAMGFFQKGVKDWKVLKLIKSGL 181
           PGR+ HTVIRT+R+NFAGYLWFLRGDL+ +   +D +  +   +K VKD KVL L+K  L
Sbjct: 182 PGRNAHTVIRTIRSNFAGYLWFLRGDLSEIFYAVDANFVLECVEKVVKDKKVLNLVKDAL 241

Query: 182 RESQGRRASNEGDEEDRSRTVRQRKKARTSKRLLKENEPKPDPYWLRTFFDFAPEEAENV 361
           +     +   +    DR    +++KK  T KR+L ENEPKPDPYWLRTFFDFAPEEA N+
Sbjct: 242 KSPMRNQELEK--RSDRKELRKKKKKKATKKRILNENEPKPDPYWLRTFFDFAPEEAVNI 299

Query: 362 PNYGHIGILSPLLANIYLNELD 427
           PNYG+ GILSPLLANI LNELD
Sbjct: 300 PNYGYCGILSPLLANICLNELD 321


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/142 (57%), Positives = 105/142 (73%)
 Frame = +2

Query: 2   PGRSPHTVIRTLRTNFAGYLWFLRGDLTHVLCDLDVDVAMGFFQKGVKDWKVLKLIKSGL 181
           PGR+ H+ IR +R+NFAGYLWFL+ DL+ VL  +D +V MG  +K VKD K+L+L+KS L
Sbjct: 206 PGRNAHSFIRAIRSNFAGYLWFLKADLSEVLSHIDENVVMGSLEKAVKDKKILRLVKSAL 265

Query: 182 RESQGRRASNEGDEEDRSRTVRQRKKARTSKRLLKENEPKPDPYWLRTFFDFAPEEAENV 361
           +  +  R   E +EE   +  ++ K A   K++L ENEPKPDPYWLRTFF+FAPEEA  V
Sbjct: 266 QSPRKTRPRVEDNEEMMKK--KKNKGAMKKKKILNENEPKPDPYWLRTFFNFAPEEAAKV 323

Query: 362 PNYGHIGILSPLLANIYLNELD 427
           P+YGH GILSPLLANI L+ELD
Sbjct: 324 PSYGHCGILSPLLANICLHELD 345


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/142 (57%), Positives = 105/142 (73%)
 Frame = +2

Query: 2   PGRSPHTVIRTLRTNFAGYLWFLRGDLTHVLCDLDVDVAMGFFQKGVKDWKVLKLIKSGL 181
           PGR+ H+ IR +R+NFAGYLWFL+ DL+ VL  +D +V MG  +K VKD K+L+L+KS L
Sbjct: 206 PGRNAHSFIRAIRSNFAGYLWFLKADLSEVLSHIDENVVMGSLEKAVKDKKILRLVKSAL 265

Query: 182 RESQGRRASNEGDEEDRSRTVRQRKKARTSKRLLKENEPKPDPYWLRTFFDFAPEEAENV 361
           +  +  R   E +EE   +  ++ K A   K++L ENEPKPDPYWLRTFF+FAPEEA  V
Sbjct: 266 QSPRKTRPRVEDNEEMMKK--KKNKGAMKKKKILNENEPKPDPYWLRTFFNFAPEEAAKV 323

Query: 362 PNYGHIGILSPLLANIYLNELD 427
           P+YGH GILSPLLANI L+ELD
Sbjct: 324 PSYGHCGILSPLLANICLHELD 345


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