BLASTX nr result

ID: Lithospermum22_contig00024345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024345
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF57081.1| reverse transcriptase [Prunus mume]                    111   5e-23
gb|ABF57064.1| reverse transcriptase [Prunus mume]                    108   4e-22
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]   106   2e-21
gb|ADP88725.1| reverse transcriptase [Fragaria orientalis]            103   1e-20
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   103   2e-20

>gb|ABF57081.1| reverse transcriptase [Prunus mume]
          Length = 88

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/80 (63%), Positives = 60/80 (75%)
 Frame = +2

Query: 11  AFLHGTLNETVYIVQPPSFVDERYPNFVCKLHK*LYGLKQAPRVWFHYLQEFLLSYGFLQ 190
           AFLHG L+E VY+ QPP FVD   PN+VCKLHK LYGLKQAPR WFH +  FLLS+GF  
Sbjct: 2   AFLHGILHEDVYMAQPPGFVDPTRPNYVCKLHKALYGLKQAPRAWFHRISSFLLSFGFQH 61

Query: 191 SQADTSLFIFSRAGIQLIML 250
           SQ+D+SLFIF  A   + +L
Sbjct: 62  SQSDSSLFIFRHASYVIFLL 81


>gb|ABF57064.1| reverse transcriptase [Prunus mume]
          Length = 88

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/80 (62%), Positives = 59/80 (73%)
 Frame = +2

Query: 11  AFLHGTLNETVYIVQPPSFVDERYPNFVCKLHK*LYGLKQAPRVWFHYLQEFLLSYGFLQ 190
           AFLHG L+E VY+ QPP FVD   PN+VCKLHK LYGLKQAP  WFH +  FLLS+GF  
Sbjct: 2   AFLHGILHEDVYMAQPPGFVDPTRPNYVCKLHKALYGLKQAPCAWFHRISSFLLSFGFQH 61

Query: 191 SQADTSLFIFSRAGIQLIML 250
           SQ+D+SLFIF  A   + +L
Sbjct: 62  SQSDSSLFIFRHASYVIFLL 81


>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
          Length = 555

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/83 (56%), Positives = 63/83 (75%)
 Frame = +2

Query: 2   IQNAFLHGTLNETVYIVQPPSFVDERYPNFVCKLHK*LYGLKQAPRVWFHYLQEFLLSYG 181
           + NAFL G L+E V++ QPPSFVD  +P++VCKLHK +YGLKQAPR W+H L++FLL+ G
Sbjct: 368 VNNAFLQGRLSENVFMAQPPSFVDSDHPSYVCKLHKAIYGLKQAPRAWYHKLRQFLLTSG 427

Query: 182 FLQSQADTSLFIFSRAGIQLIML 250
           F  S +DTSLF+F  +   L +L
Sbjct: 428 FKNSHSDTSLFVFRSSNHVLYLL 450


>gb|ADP88725.1| reverse transcriptase [Fragaria orientalis]
          Length = 88

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/70 (67%), Positives = 56/70 (80%)
 Frame = +2

Query: 11  AFLHGTLNETVYIVQPPSFVDERYPNFVCKLHK*LYGLKQAPRVWFHYLQEFLLSYGFLQ 190
           AFLHG L E VY++QPP FVD   P++VCKLHK LYGLKQAPR WF  + +FLLS GF Q
Sbjct: 2   AFLHGYLQEDVYMIQPPGFVDPSQPSYVCKLHKSLYGLKQAPRAWFQCMSKFLLSVGFRQ 61

Query: 191 SQADTSLFIF 220
           S+AD+SLFI+
Sbjct: 62  SKADSSLFIY 71


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/83 (56%), Positives = 60/83 (72%)
 Frame = +2

Query: 2   IQNAFLHGTLNETVYIVQPPSFVDERYPNFVCKLHK*LYGLKQAPRVWFHYLQEFLLSYG 181
           + NAFL GT++ETVY+ QPP F+D   P  VCKLHK +YGLKQAPR W+H L +FL+ +G
Sbjct: 249 VNNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKAIYGLKQAPRTWYHELCQFLVDFG 308

Query: 182 FLQSQADTSLFIFSRAGIQLIML 250
           F  S +DTSLF+   AG  L+ L
Sbjct: 309 FKNSHSDTSLFVL-HAGTNLLYL 330


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