BLASTX nr result

ID: Lithospermum22_contig00024309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024309
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3VX8|B Chain B, Crystal Structure Of Arabidopsis Thaliana At...    72   6e-11
gb|AFK36423.1| unknown [Medicago truncatula]                           72   6e-11
gb|AFK34948.1| unknown [Medicago truncatula]                           72   6e-11
ref|XP_003533513.1| PREDICTED: autophagy-related protein 3-like ...    72   6e-11
ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrat...    72   6e-11

>pdb|3VX8|B Chain B, Crystal Structure Of Arabidopsis Thaliana Atg7ntd-Atg3
           Complex gi|414145391|pdb|3VX8|C Chain C, Crystal
           Structure Of Arabidopsis Thaliana Atg7ntd-Atg3 Complex
          Length = 292

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 443 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 345
           EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG
Sbjct: 256 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 288


>gb|AFK36423.1| unknown [Medicago truncatula]
          Length = 310

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 443 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 345
           EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG
Sbjct: 274 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 306


>gb|AFK34948.1| unknown [Medicago truncatula]
          Length = 310

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 443 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 345
           EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG
Sbjct: 274 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 306


>ref|XP_003533513.1| PREDICTED: autophagy-related protein 3-like [Glycine max]
          Length = 272

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 443 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 345
           EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG
Sbjct: 236 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 268


>ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297312274|gb|EFH42698.1| autophagy 3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 313

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 443 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 345
           EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG
Sbjct: 277 EPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLG 309


Top