BLASTX nr result

ID: Lithospermum22_contig00024284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024284
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001118876.1| SKP1-like protein 21 [Arabidopsis thaliana] ...   254   5e-65
ref|NP_567113.1| SKP1-like protein 21 [Arabidopsis thaliana] gi|...   254   5e-65
ref|XP_002878380.1| hypothetical protein ARALYDRAFT_486615 [Arab...   250   5e-64
ref|XP_003549036.1| PREDICTED: SKP1-like protein 21-like [Glycin...   250   7e-64
ref|XP_002320801.1| predicted protein [Populus trichocarpa] gi|2...   247   6e-63

>ref|NP_001118876.1| SKP1-like protein 21 [Arabidopsis thaliana]
            gi|332646678|gb|AEE80199.1| SKP1-like protein 21
            [Arabidopsis thaliana]
          Length = 349

 Score =  254 bits (648), Expect = 5e-65
 Identities = 123/151 (81%), Positives = 136/151 (90%), Gaps = 1/151 (0%)
 Frame = +2

Query: 920  MIESDSEVIKPEMMKSYVWLQTTDGSIQEVEQEIATFCPLICQEM-HSGLGTSKSYPISL 1096
            M E +  +IKPEMMKSY+WL+T DGSIQ+VEQE+A FCP+ICQE+   G+G+SK+Y ISL
Sbjct: 1    MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 1097 PTRVNPAMLSLIIDYCRFHQVPGHSNKERKVFDEKFIRMDTNRLCELTSAADCLQLKPLV 1276
            P RVNPAMLSLI DYCRFHQVPG SNKERKV+DEKFIRMDT RLCELTSAAD LQLKPLV
Sbjct: 61   PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 1277 DLTSRALARMIEGKTPEEIREIFHLPDDLTE 1369
            DLTSRALAR+IEGKTPEEIREIFHLPDDLTE
Sbjct: 121  DLTSRALARIIEGKTPEEIREIFHLPDDLTE 151


>ref|NP_567113.1| SKP1-like protein 21 [Arabidopsis thaliana]
            gi|75155821|sp|Q8LF97.1|ASK21_ARATH RecName:
            Full=SKP1-like protein 21; Short=AtSK21
            gi|21537190|gb|AAM61531.1| putative SKP1-like protein
            [Arabidopsis thaliana] gi|332646677|gb|AEE80198.1|
            SKP1-like protein 21 [Arabidopsis thaliana]
          Length = 351

 Score =  254 bits (648), Expect = 5e-65
 Identities = 123/151 (81%), Positives = 136/151 (90%), Gaps = 1/151 (0%)
 Frame = +2

Query: 920  MIESDSEVIKPEMMKSYVWLQTTDGSIQEVEQEIATFCPLICQEM-HSGLGTSKSYPISL 1096
            M E +  +IKPEMMKSY+WL+T DGSIQ+VEQE+A FCP+ICQE+   G+G+SK+Y ISL
Sbjct: 1    MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 1097 PTRVNPAMLSLIIDYCRFHQVPGHSNKERKVFDEKFIRMDTNRLCELTSAADCLQLKPLV 1276
            P RVNPAMLSLI DYCRFHQVPG SNKERKV+DEKFIRMDT RLCELTSAAD LQLKPLV
Sbjct: 61   PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 1277 DLTSRALARMIEGKTPEEIREIFHLPDDLTE 1369
            DLTSRALAR+IEGKTPEEIREIFHLPDDLTE
Sbjct: 121  DLTSRALARIIEGKTPEEIREIFHLPDDLTE 151


>ref|XP_002878380.1| hypothetical protein ARALYDRAFT_486615 [Arabidopsis lyrata subsp.
            lyrata] gi|297324218|gb|EFH54639.1| hypothetical protein
            ARALYDRAFT_486615 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  250 bits (639), Expect = 5e-64
 Identities = 120/144 (83%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
 Frame = +2

Query: 941  VIKPEMMKSYVWLQTTDGSIQEVEQEIATFCPLICQEM-HSGLGTSKSYPISLPTRVNPA 1117
            +IKPEMMKSY+WL+T DGSIQ+VEQE+A FCP+ICQE+   G+G+SK+Y ISLP RVNPA
Sbjct: 3    IIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPA 62

Query: 1118 MLSLIIDYCRFHQVPGHSNKERKVFDEKFIRMDTNRLCELTSAADCLQLKPLVDLTSRAL 1297
            MLSLI DYCRFHQVPG SNKERK++DEKFIRMDT RLCELTSAAD LQLKPLVDLTSRAL
Sbjct: 63   MLSLIFDYCRFHQVPGRSNKERKIYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 122

Query: 1298 ARMIEGKTPEEIREIFHLPDDLTE 1369
            AR+IEGKTPEEIREIFHLPDDLTE
Sbjct: 123  ARIIEGKTPEEIREIFHLPDDLTE 146


>ref|XP_003549036.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 376

 Score =  250 bits (638), Expect = 7e-64
 Identities = 119/151 (78%), Positives = 136/151 (90%), Gaps = 1/151 (0%)
 Frame = +2

Query: 920  MIESDSEVIKPEMMKSYVWLQTTDGSIQEVEQEIATFCPLICQE-MHSGLGTSKSYPISL 1096
            M ++   V+KPEMMKSY+WLQT DGSIQ+VE+E+A FCP+ICQE + +G+G+SK+Y ISL
Sbjct: 1    MSDAAMAVVKPEMMKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKNYAISL 60

Query: 1097 PTRVNPAMLSLIIDYCRFHQVPGHSNKERKVFDEKFIRMDTNRLCELTSAADCLQLKPLV 1276
            P RVNPA+L LI+DYCRFHQVPGHSNKERK FDEKFIRMDT +LCELTSAAD LQLKPLV
Sbjct: 61   PQRVNPAILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120

Query: 1277 DLTSRALARMIEGKTPEEIREIFHLPDDLTE 1369
            DLTSRALAR+IEGKTPEEIRE FHLPDDLTE
Sbjct: 121  DLTSRALARIIEGKTPEEIRETFHLPDDLTE 151


>ref|XP_002320801.1| predicted protein [Populus trichocarpa] gi|222861574|gb|EEE99116.1|
            predicted protein [Populus trichocarpa]
          Length = 211

 Score =  247 bits (630), Expect = 6e-63
 Identities = 121/151 (80%), Positives = 134/151 (88%), Gaps = 1/151 (0%)
 Frame = +2

Query: 920  MIESDSEVIKPEMMKSYVWLQTTDGSIQEVEQEIATFCPLICQEM-HSGLGTSKSYPISL 1096
            M E D  VIKPEMMKSY+W+QTTDG+IQ+VEQE+A FCP+ICQE+   G+G+SK+  ISL
Sbjct: 1    MSEVDMAVIKPEMMKSYIWIQTTDGAIQQVEQEVAMFCPMICQEVIQKGMGSSKNCAISL 60

Query: 1097 PTRVNPAMLSLIIDYCRFHQVPGHSNKERKVFDEKFIRMDTNRLCELTSAADCLQLKPLV 1276
            P RV PAMLSLI+DYCRFHQV G SNKERK FDEKF+RMDT RLCELTSAAD LQLKPLV
Sbjct: 61   PQRVTPAMLSLILDYCRFHQVAGRSNKERKSFDEKFVRMDTKRLCELTSAADSLQLKPLV 120

Query: 1277 DLTSRALARMIEGKTPEEIREIFHLPDDLTE 1369
            DLTSRALAR+IEGKTPEEIREIFHLPDDLTE
Sbjct: 121  DLTSRALARIIEGKTPEEIREIFHLPDDLTE 151


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