BLASTX nr result
ID: Lithospermum22_contig00024253
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00024253 (423 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ... 86 3e-15 ref|XP_003638084.1| Cohesin subunit SA-3 [Medicago truncatula] g... 86 3e-15 emb|CBI32283.3| unnamed protein product [Vitis vinifera] 86 3e-15 emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera] 86 3e-15 ref|XP_004165309.1| PREDICTED: cohesin subunit SA-1-like, partia... 86 4e-15 >ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera] Length = 1143 Score = 85.9 bits (211), Expect = 3e-15 Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 3/80 (3%) Frame = -2 Query: 302 IEEF---RPMNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPR 132 ++EF R KRN+T SS K ++LIE+IKG+GK IPQVVK WVE YEKDP+ Sbjct: 52 VDEFVEPRARAKRNRTEGSSTAA---KKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPK 108 Query: 131 HAMAELLSMLFEACGAKYQI 72 AM ELL MLFEACGAKY + Sbjct: 109 PAMVELLMMLFEACGAKYHL 128 >ref|XP_003638084.1| Cohesin subunit SA-3 [Medicago truncatula] gi|355504019|gb|AES85222.1| Cohesin subunit SA-3 [Medicago truncatula] Length = 1196 Score = 85.9 bits (211), Expect = 3e-15 Identities = 52/111 (46%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Frame = -2 Query: 407 RGKKHKLPPQPPKNKKGASRLYXXXXXXXXXXXXGIEEFRPMNKRNKT-MKSSNIVLPGK 231 R K+ + P QPPK +E RP+ K + +K K Sbjct: 14 RSKRGRPPKQPPKEID-----VDVDMAERESSPEDSDEPRPVQKSKRNRVKEGTTSTTLK 68 Query: 230 ITHETLIEIIKGSGKQIPQVVKRWVELYEKDPRHAMAELLSMLFEACGAKY 78 T ETLIE IKG+GK IP VVK WVE YEKDPR AM ELL+MLFEACGAK+ Sbjct: 69 PTDETLIEAIKGNGKLIPHVVKLWVESYEKDPRSAMVELLTMLFEACGAKF 119 >emb|CBI32283.3| unnamed protein product [Vitis vinifera] Length = 1144 Score = 85.9 bits (211), Expect = 3e-15 Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 3/80 (3%) Frame = -2 Query: 302 IEEF---RPMNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPR 132 ++EF R KRN+T SS K ++LIE+IKG+GK IPQVVK WVE YEKDP+ Sbjct: 52 VDEFVEPRARAKRNRTEGSSTAA---KKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPK 108 Query: 131 HAMAELLSMLFEACGAKYQI 72 AM ELL MLFEACGAKY + Sbjct: 109 PAMVELLMMLFEACGAKYHL 128 >emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera] Length = 1616 Score = 85.9 bits (211), Expect = 3e-15 Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 3/80 (3%) Frame = -2 Query: 302 IEEF---RPMNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPR 132 ++EF R KRN+T SS K ++LIE+IKG+GK IPQVVK WVE YEKDP+ Sbjct: 438 VDEFVEPRARAKRNRTEGSSTAA---KKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPK 494 Query: 131 HAMAELLSMLFEACGAKYQI 72 AM ELL MLFEACGAKY + Sbjct: 495 PAMVELLMMLFEACGAKYHL 514 >ref|XP_004165309.1| PREDICTED: cohesin subunit SA-1-like, partial [Cucumis sativus] Length = 1123 Score = 85.5 bits (210), Expect = 4e-15 Identities = 44/77 (57%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 299 EEFRP-MNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPRHAM 123 EE RP KR++ +SN +++ ++LI++IKG+GK IPQVVKRWVE YEKDP+ +M Sbjct: 44 EESRPPRTKRHRLEGTSNAA--HEVSEQSLIDVIKGNGKFIPQVVKRWVERYEKDPKTSM 101 Query: 122 AELLSMLFEACGAKYQI 72 ELL+ LFEACGAKY I Sbjct: 102 VELLATLFEACGAKYHI 118