BLASTX nr result

ID: Lithospermum22_contig00024253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024253
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ...    86   3e-15
ref|XP_003638084.1| Cohesin subunit SA-3 [Medicago truncatula] g...    86   3e-15
emb|CBI32283.3| unnamed protein product [Vitis vinifera]               86   3e-15
emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]    86   3e-15
ref|XP_004165309.1| PREDICTED: cohesin subunit SA-1-like, partia...    86   4e-15

>ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera]
          Length = 1143

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -2

Query: 302 IEEF---RPMNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPR 132
           ++EF   R   KRN+T  SS      K   ++LIE+IKG+GK IPQVVK WVE YEKDP+
Sbjct: 52  VDEFVEPRARAKRNRTEGSSTAA---KKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPK 108

Query: 131 HAMAELLSMLFEACGAKYQI 72
            AM ELL MLFEACGAKY +
Sbjct: 109 PAMVELLMMLFEACGAKYHL 128


>ref|XP_003638084.1| Cohesin subunit SA-3 [Medicago truncatula]
           gi|355504019|gb|AES85222.1| Cohesin subunit SA-3
           [Medicago truncatula]
          Length = 1196

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/111 (46%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = -2

Query: 407 RGKKHKLPPQPPKNKKGASRLYXXXXXXXXXXXXGIEEFRPMNKRNKT-MKSSNIVLPGK 231
           R K+ + P QPPK                       +E RP+ K  +  +K        K
Sbjct: 14  RSKRGRPPKQPPKEID-----VDVDMAERESSPEDSDEPRPVQKSKRNRVKEGTTSTTLK 68

Query: 230 ITHETLIEIIKGSGKQIPQVVKRWVELYEKDPRHAMAELLSMLFEACGAKY 78
            T ETLIE IKG+GK IP VVK WVE YEKDPR AM ELL+MLFEACGAK+
Sbjct: 69  PTDETLIEAIKGNGKLIPHVVKLWVESYEKDPRSAMVELLTMLFEACGAKF 119


>emb|CBI32283.3| unnamed protein product [Vitis vinifera]
          Length = 1144

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -2

Query: 302 IEEF---RPMNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPR 132
           ++EF   R   KRN+T  SS      K   ++LIE+IKG+GK IPQVVK WVE YEKDP+
Sbjct: 52  VDEFVEPRARAKRNRTEGSSTAA---KKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPK 108

Query: 131 HAMAELLSMLFEACGAKYQI 72
            AM ELL MLFEACGAKY +
Sbjct: 109 PAMVELLMMLFEACGAKYHL 128


>emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]
          Length = 1616

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -2

Query: 302 IEEF---RPMNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPR 132
           ++EF   R   KRN+T  SS      K   ++LIE+IKG+GK IPQVVK WVE YEKDP+
Sbjct: 438 VDEFVEPRARAKRNRTEGSSTAA---KKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPK 494

Query: 131 HAMAELLSMLFEACGAKYQI 72
            AM ELL MLFEACGAKY +
Sbjct: 495 PAMVELLMMLFEACGAKYHL 514


>ref|XP_004165309.1| PREDICTED: cohesin subunit SA-1-like, partial [Cucumis sativus]
          Length = 1123

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/77 (57%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 299 EEFRP-MNKRNKTMKSSNIVLPGKITHETLIEIIKGSGKQIPQVVKRWVELYEKDPRHAM 123
           EE RP   KR++   +SN     +++ ++LI++IKG+GK IPQVVKRWVE YEKDP+ +M
Sbjct: 44  EESRPPRTKRHRLEGTSNAA--HEVSEQSLIDVIKGNGKFIPQVVKRWVERYEKDPKTSM 101

Query: 122 AELLSMLFEACGAKYQI 72
            ELL+ LFEACGAKY I
Sbjct: 102 VELLATLFEACGAKYHI 118


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