BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024239
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...   337   4e-90
ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...   333   3e-89
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar...   332   1e-88
ref|XP_002892331.1| pentatricopeptide repeat-containing protein ...   328   2e-87
ref|XP_002525148.1| pentatricopeptide repeat-containing protein,...   319   8e-85

>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  337 bits (863), Expect = 4e-90
 Identities = 163/281 (58%), Positives = 212/281 (75%)
 Frame = +3

Query: 9   NPNPFAFLTSYPQSTQTRIIDQMLQSFXXXXXXXXXXLVYSCLLSYTLQTTKHLPLALAI 188
           NPNPF+FL+++ Q+ +T+++D++LQSF          + Y+CLLS+TLQ+   LPLALAI
Sbjct: 63  NPNPFSFLSTFSQNLRTQVVDEILQSFIPLRPRSRPQIAYACLLSFTLQSANPLPLALAI 122

Query: 189 IQRTIRSGCLPLPQTYLFLSKAWLNRRKECESVSSILLEMQSVGYTPDTGTCNYLISSLC 368
           +QRT+RSGC+P+PQT+L LS AWL+RR++  SVS+IL EMQS+GY PD GTCNYLI SLC
Sbjct: 123 LQRTLRSGCIPVPQTHLLLSSAWLSRRRQSHSVSNILSEMQSIGYYPDCGTCNYLILSLC 182

Query: 369 KVDHVDEAVRVLKGMIVAGCIPDLDSYGTLICEMCELRMTDGVCVMIKEMVGKFGLNPRQ 548
            +D + EAV VLK M   GCIPDL+ YG++I  MC +R T     ++KEMV K GL PRQ
Sbjct: 183 AIDQLVEAVIVLKSMGQVGCIPDLEGYGSVIGAMCAMRRTTDATELMKEMVAKIGLTPRQ 242

Query: 549 GMVVKMLDTLQANKEIWRAVEVIEFLESRNVYLGFEGYEVVLEGCLESRQFILAAKTAMK 728
           G V+ ++  L+A KEIW+AVE+IEFLE  +   GF  YE VLEGCL   +F+LA K  M 
Sbjct: 243 GTVLNLVAALRAKKEIWKAVEMIEFLEGEDFNAGFASYESVLEGCLACHEFVLAGKVVMG 302

Query: 729 MTDRGFIPYIKVRQKMVEGLANIGELELACAVRRRFSELKS 851
           MT RGFIPYI VRQK+VEGLAN+GE +LA AVR+RF++L+S
Sbjct: 303 MTARGFIPYIGVRQKVVEGLANLGEWKLALAVRQRFADLRS 343


>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score =  333 bits (855), Expect = 3e-89
 Identities = 162/282 (57%), Positives = 216/282 (76%)
 Frame = +3

Query: 6   QNPNPFAFLTSYPQSTQTRIIDQMLQSFXXXXXXXXXXLVYSCLLSYTLQTTKHLPLALA 185
           Q  NPF+F +S+PQ+ + +I+D+MLQS           L YS LLSYTLQ++   PLALA
Sbjct: 61  QISNPFSFFSSFPQNIRVQIVDEMLQSLIPIRPRSKAQLTYSYLLSYTLQSSHPFPLALA 120

Query: 186 IIQRTIRSGCLPLPQTYLFLSKAWLNRRKECESVSSILLEMQSVGYTPDTGTCNYLISSL 365
           ++QRT+RSGC+P+PQT++ LS AWL++     SV++ILL+MQS+GY PD GTCNYL+SSL
Sbjct: 121 VLQRTLRSGCVPVPQTHVLLSSAWLDQHCLSHSVANILLQMQSIGYHPDCGTCNYLLSSL 180

Query: 366 CKVDHVDEAVRVLKGMIVAGCIPDLDSYGTLICEMCELRMTDGVCVMIKEMVGKFGLNPR 545
           C VD ++EAV+VL+GM  AGCIPD  SYG +I  MC +R T     ++K+MV ++GL P 
Sbjct: 181 CAVDQLEEAVKVLRGMGGAGCIPDSSSYGAVIGAMCRVRKTAKALDLMKQMVVQYGLTPG 240

Query: 546 QGMVVKMLDTLQANKEIWRAVEVIEFLESRNVYLGFEGYEVVLEGCLESRQFILAAKTAM 725
           QG +VK+L  L+AN+EIW+AVE+IEFLE     +GFE YE+V+EGCLE R+++LAAK A 
Sbjct: 241 QGTLVKLLAALRANREIWKAVEMIEFLEKEGNSVGFESYELVIEGCLEKREYVLAAKVAT 300

Query: 726 KMTDRGFIPYIKVRQKMVEGLANIGELELACAVRRRFSELKS 851
            MT+RGFIPYI+VRQK++EGLA+I E  LACAVR+RF+ LKS
Sbjct: 301 GMTERGFIPYIRVRQKIIEGLASIDEWNLACAVRQRFAALKS 342


>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
           similarity to an unknown protein F23N19.4 gi|6630464
           from Arabidopsis thaliana gb|AC007190 and contains
           multiple PPR PF|01535 repeats. EST gb|T44174 comes from
           this gene [Arabidopsis thaliana]
           gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
           thaliana] gi|20465473|gb|AAM20196.1| unknown protein
           [Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
           unknown [Arabidopsis thaliana]
           gi|332189849|gb|AEE27970.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  332 bits (850), Expect = 1e-88
 Identities = 160/282 (56%), Positives = 217/282 (76%)
 Frame = +3

Query: 6   QNPNPFAFLTSYPQSTQTRIIDQMLQSFXXXXXXXXXXLVYSCLLSYTLQTTKHLPLALA 185
           QN   F+FL+++ +  + R+ID++LQSF          +VYS LL+Y LQ++  LPL+ A
Sbjct: 62  QNSTLFSFLSAFQRHHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFA 121

Query: 186 IIQRTIRSGCLPLPQTYLFLSKAWLNRRKECESVSSILLEMQSVGYTPDTGTCNYLISSL 365
           I+QRT+RSGCLP PQT+L LS AWL RR+  +SV+ I+ EM+ +GY+PDTGTCNYL+SSL
Sbjct: 122 ILQRTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSL 181

Query: 366 CKVDHVDEAVRVLKGMIVAGCIPDLDSYGTLICEMCELRMTDGVCVMIKEMVGKFGLNPR 545
           C VD +DEA++V++ M  AGCIPD++SYG +I  +C  R T  V  ++KEMV K G++PR
Sbjct: 182 CAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPR 241

Query: 546 QGMVVKMLDTLQANKEIWRAVEVIEFLESRNVYLGFEGYEVVLEGCLESRQFILAAKTAM 725
           +GM+ K+   L+AN+EIW+A+E+IEF+ESR+  + FE YEVV+EGCLE R++ILA K  M
Sbjct: 242 KGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILAGKVVM 301

Query: 726 KMTDRGFIPYIKVRQKMVEGLANIGELELACAVRRRFSELKS 851
           +MTDRGFIPYIKVRQK+VE L NIGE +LAC VR+R SEL+S
Sbjct: 302 RMTDRGFIPYIKVRQKVVERLINIGEWKLACTVRQRVSELRS 343


>ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338173|gb|EFH68590.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 343

 Score =  328 bits (840), Expect = 2e-87
 Identities = 159/282 (56%), Positives = 216/282 (76%)
 Frame = +3

Query: 6   QNPNPFAFLTSYPQSTQTRIIDQMLQSFXXXXXXXXXXLVYSCLLSYTLQTTKHLPLALA 185
           QN   F+FL+++    + R+ID++LQSF          +VYS LL+Y LQ++  LPL+ A
Sbjct: 62  QNSMLFSFLSAFQHQHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFA 121

Query: 186 IIQRTIRSGCLPLPQTYLFLSKAWLNRRKECESVSSILLEMQSVGYTPDTGTCNYLISSL 365
           I+QRT+RSGCLP PQT L LS AWL RR+  +SV+ I+ EM+ +GY+PDTGTCNYL+SSL
Sbjct: 122 ILQRTLRSGCLPNPQTQLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSL 181

Query: 366 CKVDHVDEAVRVLKGMIVAGCIPDLDSYGTLICEMCELRMTDGVCVMIKEMVGKFGLNPR 545
           C VD +DEA++V++ M  AGCIPD++SYG +I  +C  R T+ V  ++KEMV K G++PR
Sbjct: 182 CAVDKLDEAIKVVEEMGAAGCIPDVESYGAVINSLCLARKTNDVVKIVKEMVSKAGISPR 241

Query: 546 QGMVVKMLDTLQANKEIWRAVEVIEFLESRNVYLGFEGYEVVLEGCLESRQFILAAKTAM 725
           +GM+ K+   L+AN+EIW+A+E+IEF+ESR+  + FE YEVV+EGCLE R++ILA K  M
Sbjct: 242 KGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILAGKMVM 301

Query: 726 KMTDRGFIPYIKVRQKMVEGLANIGELELACAVRRRFSELKS 851
           +MTDRGFIPYIKVRQK+VE L +IGE +LAC VR+R SEL+S
Sbjct: 302 RMTDRGFIPYIKVRQKVVERLISIGEWKLACTVRQRLSELRS 343


>ref|XP_002525148.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535607|gb|EEF37275.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 354

 Score =  319 bits (817), Expect = 8e-85
 Identities = 161/283 (56%), Positives = 207/283 (73%)
 Frame = +3

Query: 3   LQNPNPFAFLTSYPQSTQTRIIDQMLQSFXXXXXXXXXXLVYSCLLSYTLQTTKHLPLAL 182
           L NPNPF+FL+++P + +T IID++LQSF          LVYSCLLS+TLQ+   LPLAL
Sbjct: 72  LHNPNPFSFLSTFPLNQRTHIIDKILQSFITIRPHSRLKLVYSCLLSHTLQSPNPLPLAL 131

Query: 183 AIIQRTIRSGCLPLPQTYLFLSKAWLNRRKECESVSSILLEMQSVGYTPDTGTCNYLISS 362
           AI+QR  RSG +P PQ  LFL+ AWLN R +  +V+ ILLEM+S+GY PD G CNY+I S
Sbjct: 132 AILQRGFRSGFMPEPQIRLFLTSAWLNTRVQLHTVAGILLEMESIGYYPDCGICNYIIYS 191

Query: 363 LCKVDHVDEAVRVLKGMIVAGCIPDLDSYGTLICEMCELRMTDGVCVMIKEMVGKFGLNP 542
           LC VD + EAV+VLKGM  AGC+PDL+ Y T+I  M + R T     ++KEMV K GLNP
Sbjct: 192 LCSVDQLPEAVKVLKGMSGAGCVPDLECYDTVIGSMSKARKTVDAVEIMKEMVVKVGLNP 251

Query: 543 RQGMVVKMLDTLQANKEIWRAVEVIEFLESRNVYLGFEGYEVVLEGCLESRQFILAAKTA 722
           RQG ++K+   L+AN+EI  AVE+IEFLE     +GF  Y++VLEGCLE +++ILAAK  
Sbjct: 252 RQGTMMKLAAALRANREILIAVELIEFLEREGCVVGFGCYQLVLEGCLERKEYILAAKVV 311

Query: 723 MKMTDRGFIPYIKVRQKMVEGLANIGELELACAVRRRFSELKS 851
           M+MTD+GFIPYIKVRQK+VEGL +     +AC VR+RF+EL S
Sbjct: 312 MRMTDKGFIPYIKVRQKVVEGLIDADAWNIACTVRQRFAELSS 354