BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024228
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36552.3| unnamed protein product [Vitis vinifera]              212   6e-53
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...   212   6e-53
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ...   200   2e-49
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi...   196   3e-48
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   195   7e-48

>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  212 bits (540), Expect = 6e-53
 Identities = 115/242 (47%), Positives = 149/242 (61%)
 Frame = -1

Query: 727 KNSIITLIKNSKTLPQLNQIHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLT 548
           +N  +TLI    TL QLNQ HAQIILN   N L+  TKLTHKL   +A +QA  LF ++ 
Sbjct: 10  RNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIP 69

Query: 547 KTNPPDLFLYNVLIRGLSQNGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEK 368
               PDLFLYNVLIR  S N  P  ++  Y  LR+ T LEPDNFTY FV+S  S+LG   
Sbjct: 70  N---PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLG--- 123

Query: 367 VGVLIHGHALISGYAKDCYAGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLV 188
           +G+L+H H++++G+  D + GS +V  Y    ++  A KVFDG+ E DTV WNTM+S LV
Sbjct: 124 LGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLV 183

Query: 187 KISFFHECCVVFRDMVRKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDY 8
           K S F E  ++F DMV+ G  FD           A L+DL  G+ IQC+ +KVG   H Y
Sbjct: 184 KNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAY 243

Query: 7   VL 2
           V+
Sbjct: 244 VI 245



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 45/180 (25%), Positives = 86/180 (47%)
 Frame = -1

Query: 670 IHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQ 491
           +HA  I+  F + L   + +    F F     A+ +F  + +    D  L+N ++ GL +
Sbjct: 128 LHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLER---DTVLWNTMVSGLVK 184

Query: 490 NGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCY 311
           N C  +++L + ++ +  +   D+ T   V+  V+ L    +G+ I   A+  G+    Y
Sbjct: 185 NSCFDEAILIFGDMVKGGI-GFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAY 243

Query: 310 AGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISFFHECCVVFRDMVRKG 131
             +GL  +Y   G+IE A  +F  I +PD V++N MIS     +       +F++++  G
Sbjct: 244 VITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSG 303


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  212 bits (540), Expect = 6e-53
 Identities = 115/242 (47%), Positives = 149/242 (61%)
 Frame = -1

Query: 727 KNSIITLIKNSKTLPQLNQIHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLT 548
           +N  +TLI    TL QLNQ HAQIILN   N L+  TKLTHKL   +A +QA  LF ++ 
Sbjct: 10  RNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIP 69

Query: 547 KTNPPDLFLYNVLIRGLSQNGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEK 368
               PDLFLYNVLIR  S N  P  ++  Y  LR+ T LEPDNFTY FV+S  S+LG   
Sbjct: 70  N---PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLG--- 123

Query: 367 VGVLIHGHALISGYAKDCYAGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLV 188
           +G+L+H H++++G+  D + GS +V  Y    ++  A KVFDG+ E DTV WNTM+S LV
Sbjct: 124 LGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLV 183

Query: 187 KISFFHECCVVFRDMVRKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDY 8
           K S F E  ++F DMV+ G  FD           A L+DL  G+ IQC+ +KVG   H Y
Sbjct: 184 KNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAY 243

Query: 7   VL 2
           V+
Sbjct: 244 VI 245



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/161 (26%), Positives = 76/161 (47%)
 Frame = -1

Query: 622 STKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQNGCPLDSLLAYLELRE 443
           ST LT           A+ LF    +++   L  +N +I G +QNG    ++  + E+ +
Sbjct: 346 STALTTVYSRLNEIESARLLFD---ESSEKSLASWNAMISGYAQNGLTEKAISLFQEM-Q 401

Query: 442 RTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCYAGSGLVDMYVNLGKIE 263
           +  + P+  T   ++SA + LG   +G  +H       +  + +  + L+DMY   G I 
Sbjct: 402 KCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSIT 461

Query: 262 DAYKVFDGIAEPDTVAWNTMISSLVKISFFHECCVVFRDMV 140
           +A ++F  + E + V WN MIS      + HE   +F +M+
Sbjct: 462 EAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEML 502



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 45/180 (25%), Positives = 86/180 (47%)
 Frame = -1

Query: 670 IHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQ 491
           +HA  I+  F + L   + +    F F     A+ +F  + +    D  L+N ++ GL +
Sbjct: 128 LHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLER---DTVLWNTMVSGLVK 184

Query: 490 NGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCY 311
           N C  +++L + ++ +  +   D+ T   V+  V+ L    +G+ I   A+  G+    Y
Sbjct: 185 NSCFDEAILIFGDMVKGGI-GFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAY 243

Query: 310 AGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISFFHECCVVFRDMVRKG 131
             +GL  +Y   G+IE A  +F  I +PD V++N MIS     +       +F++++  G
Sbjct: 244 VITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSG 303


>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511336|gb|AES92478.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  200 bits (509), Expect = 2e-49
 Identities = 110/242 (45%), Positives = 145/242 (59%)
 Frame = -1

Query: 727 KNSIITLIKNSKTLPQLNQIHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLT 548
           +N++ +LI  + T P L Q HAQ ILN +   L   TKLT KLFDF AT  A+ LF S+ 
Sbjct: 12  RNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVP 71

Query: 547 KTNPPDLFLYNVLIRGLSQNGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEK 368
           K   PD+FL+NVL+RG S N  P  S+  Y  LR  T L PDNFTY F V+A S    +K
Sbjct: 72  K---PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSN---DK 125

Query: 367 VGVLIHGHALISGYAKDCYAGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLV 188
             +L+H H++I GY  + + GS LVD+Y    ++  A KVFDG+ E DTV WNTMI+ LV
Sbjct: 126 HLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLV 185

Query: 187 KISFFHECCVVFRDMVRKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDY 8
           K   F +   +FR+MV  G R D           A L++L+ G+ IQC+ +K+G    DY
Sbjct: 186 KNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDY 245

Query: 7   VL 2
           VL
Sbjct: 246 VL 247



 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 39/130 (30%), Positives = 66/130 (50%)
 Frame = -1

Query: 520 YNVLIRGLSQNGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHA 341
           +N +I G +QNG    ++  + E+  +T   P+  T   ++SA + LG    G  +H   
Sbjct: 379 WNAMISGYTQNGSTETAISLFKEMM-KTEFTPNAVTITTILSACAQLGSLSFGKWVHHLI 437

Query: 340 LISGYAKDCYAGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISFFHECC 161
                  + Y  + LVDMY   G I +A+++FD ++E +TV WNTMI       + HE  
Sbjct: 438 KSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEAL 497

Query: 160 VVFRDMVRKG 131
            ++ +M+  G
Sbjct: 498 KLYNEMLHLG 507



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
 Frame = -1

Query: 670 IHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQ 491
           +HA  I++ + +++   + L      F     A+ +F  + +    D  L+N +I GL +
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPER---DTVLWNTMINGLVK 186

Query: 490 NGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCY 311
           N C  DS+  + E+    +   D+ T   V+ A + L   KVG+ I   AL  G+    Y
Sbjct: 187 NCCFDDSIQLFREMVADGV-RVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDY 245

Query: 310 AGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISFFHECCV-VFRDMVRK 134
             +GL+ +Y   G +  A  +F  I  PD +A+N MIS     +   EC V +FR+++  
Sbjct: 246 VLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFT-ANGGTECSVKLFRELLFS 304

Query: 133 GGR 125
           G R
Sbjct: 305 GER 307


>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  196 bits (499), Expect = 3e-48
 Identities = 109/238 (45%), Positives = 141/238 (59%)
 Frame = -1

Query: 715 ITLIKNSKTLPQLNQIHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNP 536
           +TL+ N+ TL QL QI AQ+IL+     L   TKLTHK FD  A    + LF  ++K   
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSK--- 74

Query: 535 PDLFLYNVLIRGLSQNGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVL 356
           PDLFL+NVLIRG S NG P  S+  Y  LR++T L PDNFTY F +SA S L  E+VGVL
Sbjct: 75  PDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVL 134

Query: 355 IHGHALISGYAKDCYAGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISF 176
           +H H+++ G A + + GS +VD+Y    + E A KVFD + E DTV WNTMIS   + S+
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194

Query: 175 FHECCVVFRDMVRKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDYVL 2
           F +   VF DM+  G  FD           A L++ R G+ IQC+  K G     YVL
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252



 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
 Frame = -1

Query: 670 IHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQ 491
           +HA  I++  +++L   + +    F F     A+ +F  + +    D  L+N +I G S+
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER---DTVLWNTMISGFSR 191

Query: 490 NGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCY 311
           N    DS+  ++++ +   L  D+ T   V++AV+ L   ++G+ I   A   G   D Y
Sbjct: 192 NSYFEDSIRVFVDMLD-VGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250

Query: 310 AGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISFFHE---CCVVFRDMV 140
             +GL+ +Y   GK      +FD I +PD +++N MIS     +F HE      +FR+++
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISG---YTFNHETESAVTLFRELL 307

Query: 139 RKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDYV 5
             G R +                L+   +IQ + +K+G  L   V
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV 352



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 45/164 (27%), Positives = 75/164 (45%)
 Frame = -1

Query: 622 STKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQNGCPLDSLLAYLELRE 443
           ST LT           A+ LF    + +   L  +N +I G +QNG    ++  + E+  
Sbjct: 353 STALTTVYCRLNEVQFARQLFDESPEKS---LASWNAMISGYTQNGLTDRAISLFQEMMP 409

Query: 442 RTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCYAGSGLVDMYVNLGKIE 263
           +  L P+  T   ++SA + LG   +G  +HG         + Y  + LVDMY   G I 
Sbjct: 410 Q--LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIV 467

Query: 262 DAYKVFDGIAEPDTVAWNTMISSLVKISFFHECCVVFRDMVRKG 131
           +A ++FD + + + V WN MI+         E   +F +M++ G
Sbjct: 468 EARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSG 511


>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  195 bits (496), Expect = 7e-48
 Identities = 109/238 (45%), Positives = 140/238 (58%)
 Frame = -1

Query: 715 ITLIKNSKTLPQLNQIHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNP 536
           +TL+ N+ TL QL QI AQ+IL+     L   TKLTHK FD  A    + LF  ++K   
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSK--- 74

Query: 535 PDLFLYNVLIRGLSQNGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVL 356
           PDLFL+NVLIRG S NG P  S+  Y  LR+ T L PDNFTY F +SA S L  E+VGVL
Sbjct: 75  PDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVL 134

Query: 355 IHGHALISGYAKDCYAGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISF 176
           +H H+++ G A + + GS +VD+Y    + E A KVFD + E DTV WNTMIS   + S+
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194

Query: 175 FHECCVVFRDMVRKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDYVL 2
           F +   VF DM+  G  FD           A L++ R G+ IQC+  K G     YVL
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252



 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
 Frame = -1

Query: 670 IHAQIILNNFSNHLIPSTKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQ 491
           +HA  I++  +++L   + +    F F     A+ +F  + +    D  L+N +I G S+
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER---DTVLWNTMISGFSR 191

Query: 490 NGCPLDSLLAYLELRERTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCY 311
           N    DS+  ++++ +   L  D+ T   V++AV+ L   ++G+ I   A   G   D Y
Sbjct: 192 NSYFEDSIRVFVDMLD-VGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250

Query: 310 AGSGLVDMYVNLGKIEDAYKVFDGIAEPDTVAWNTMISSLVKISFFHE---CCVVFRDMV 140
             +GL+ +Y   GK      +FD I +PD +++N MIS     +F HE      +FR+++
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISG---YTFNHETESAVTLFRELL 307

Query: 139 RKGGRFDXXXXXXXXXXXAGLKDLRKGVMIQCVGIKVGCDLHDYV 5
             G R +                L+   +IQ + +K+G  L   V
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV 352



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 45/164 (27%), Positives = 75/164 (45%)
 Frame = -1

Query: 622 STKLTHKLFDFQATNQAKNLFKSLTKTNPPDLFLYNVLIRGLSQNGCPLDSLLAYLELRE 443
           ST LT           A+ LF    + +   L  +N +I G +QNG    ++  + E+  
Sbjct: 353 STALTTVYCRLNEVQFARQLFDESPEKS---LASWNAMISGYTQNGLTDRAISLFQEMMP 409

Query: 442 RTLLEPDNFTYLFVVSAVSALGCEKVGVLIHGHALISGYAKDCYAGSGLVDMYVNLGKIE 263
           +  L P+  T   ++SA + LG   +G  +HG         + Y  + LVDMY   G I 
Sbjct: 410 Q--LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIV 467

Query: 262 DAYKVFDGIAEPDTVAWNTMISSLVKISFFHECCVVFRDMVRKG 131
           +A ++FD + + + V WN MI+         E   +F +M++ G
Sbjct: 468 EARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSG 511