BLASTX nr result

ID: Lithospermum22_contig00024212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024212
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus ...   142   2e-32
ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 ...   142   3e-32
emb|CAN83652.1| hypothetical protein VITISV_015455 [Vitis vinifera]   142   3e-32
ref|XP_002302708.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
gb|AFK36115.1| unknown [Lotus japonicus]                              137   7e-31

>ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537629|gb|EEF39252.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 330

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = -3

Query: 479 MCACKAASVTIVDGLKAAETKEKCPLCREARVYEGALHMEELNILLSRRCPEYWGERLQH 300
           MCAC AASVTIVDGL+AAE KEKCPLCREA V EGA+H+EELNILLSR CPEYW +RLQ 
Sbjct: 248 MCACSAASVTIVDGLRAAEPKEKCPLCREAGVNEGAVHLEELNILLSRSCPEYWEQRLQS 307

Query: 299 ERIERIRQAKEHWDSVCRAFM 237
           ER+ERIRQAKEHW+  CRAFM
Sbjct: 308 ERVERIRQAKEHWEFQCRAFM 328


>ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 [Vitis vinifera]
           gi|297743873|emb|CBI36843.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/81 (82%), Positives = 71/81 (87%)
 Frame = -3

Query: 479 MCACKAASVTIVDGLKAAETKEKCPLCREARVYEGALHMEELNILLSRRCPEYWGERLQH 300
           MCAC AASVTIVDGLK AE KEKCPLCREA VYEGA+H+EELNILLSR C EYW +RLQ 
Sbjct: 242 MCACSAASVTIVDGLKIAEPKEKCPLCREAGVYEGAVHLEELNILLSRSCHEYWEQRLQT 301

Query: 299 ERIERIRQAKEHWDSVCRAFM 237
           ER ERIRQAKEHW+S CRAFM
Sbjct: 302 ERTERIRQAKEHWESQCRAFM 322


>emb|CAN83652.1| hypothetical protein VITISV_015455 [Vitis vinifera]
          Length = 239

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/81 (82%), Positives = 71/81 (87%)
 Frame = -3

Query: 479 MCACKAASVTIVDGLKAAETKEKCPLCREARVYEGALHMEELNILLSRRCPEYWGERLQH 300
           MCAC AASVTIVDGLK AE KEKCPLCREA VYEGA+H+EELNILLSR C EYW +RLQ 
Sbjct: 157 MCACSAASVTIVDGLKIAEPKEKCPLCREAGVYEGAVHLEELNILLSRSCHEYWEQRLQT 216

Query: 299 ERIERIRQAKEHWDSVCRAFM 237
           ER ERIRQAKEHW+S CRAFM
Sbjct: 217 ERTERIRQAKEHWESQCRAFM 237


>ref|XP_002302708.1| predicted protein [Populus trichocarpa] gi|222844434|gb|EEE81981.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/81 (80%), Positives = 71/81 (87%)
 Frame = -3

Query: 479 MCACKAASVTIVDGLKAAETKEKCPLCREARVYEGALHMEELNILLSRRCPEYWGERLQH 300
           MCAC AASVTIVDGLKAAE KEKCPLCR+  VYEG+LH+EELNILLSR C EYW +RLQ 
Sbjct: 238 MCACSAASVTIVDGLKAAEPKEKCPLCRKTGVYEGSLHLEELNILLSRSCHEYWEQRLQT 297

Query: 299 ERIERIRQAKEHWDSVCRAFM 237
           ERIERIRQ KEHW+S CRAF+
Sbjct: 298 ERIERIRQVKEHWESQCRAFV 318


>gb|AFK36115.1| unknown [Lotus japonicus]
          Length = 169

 Score =  137 bits (346), Expect = 7e-31
 Identities = 60/81 (74%), Positives = 71/81 (87%)
 Frame = -3

Query: 479 MCACKAASVTIVDGLKAAETKEKCPLCREARVYEGALHMEELNILLSRRCPEYWGERLQH 300
           MCAC AASV+IVDGLK+A TK+KCPLCRE  VYEGA+H+EELNILL RRCPEYW +RL  
Sbjct: 87  MCACSAASVSIVDGLKSAVTKQKCPLCRENAVYEGAVHLEELNILLGRRCPEYWEQRLHS 146

Query: 299 ERIERIRQAKEHWDSVCRAFM 237
           ER+ER++Q KEHW+S CRAF+
Sbjct: 147 ERVERVKQIKEHWESQCRAFL 167


Top