BLASTX nr result

ID: Lithospermum22_contig00024182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024182
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11...    77   2e-12
emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]    77   2e-12
ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74...    74   9e-12
emb|CBI31984.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74...    72   5e-11

>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 443

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6   WACMSFRVDKIDVHHGKRPLEKDDEEEVIIRKSFKNSDD-ELLDTALTLGSISKALVETA 182
           W   +F V  I++ + KRPLE  D E+V +RK  K SD  E  +T   L  +S +    +
Sbjct: 23  WIYNTFLV--IELSNSKRPLE--DGEDVGLRKFSKPSDGHETEETMQGLHDLSLSQANQS 78

Query: 183 GNQQYAGDNSDSSSLIHNIGRDNSISCLIRCSRSDYGAIAS 305
                 GD SD SSLI  IGRDNSI+CL++CSRSDYG+IAS
Sbjct: 79  NTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIAS 119


>emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]
          Length = 1318

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6   WACMSFRVDKIDVHHGKRPLEKDDEEEVIIRKSFKNSDD-ELLDTALTLGSISKALVETA 182
           W   +F V  I++ + KRPLE  D E+V +RK  K SD  E  +T   L  +S +    +
Sbjct: 23  WIYNTFLV--IELSNSKRPLE--DGEDVGLRKFSKPSDGHETEETMQGLHDLSLSQANQS 78

Query: 183 GNQQYAGDNSDSSSLIHNIGRDNSISCLIRCSRSDYGAIAS 305
                 GD SD SSLI  IGRDNSI+CL++CSRSDYG+IAS
Sbjct: 79  NTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIAS 119


>ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6   WACMSFRVDKIDVHHGKRPLEKDDEEEVIIRKSFKNSD-DELLDTALTLGSISKALVETA 182
           W   SF V  +++   KR LE   EEE ++ KS K SD  E  +T +   ++S + V  A
Sbjct: 23  WIYNSFCV--MELASNKRQLEL--EEEAVLTKSCKLSDAPEEGETKMNFQNLSLS-VNQA 77

Query: 183 GNQQYAGDNSDSSSLIHNIGRDNSISCLIRCSRSDYGAIAS 305
            +Q ++ D SDSSSLI  +GRD SI+CL+RCSRSDYG+IAS
Sbjct: 78  NDQNHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSIAS 118


>emb|CBI31984.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 14/115 (12%)
 Frame = +3

Query: 3   NWACMSFRVDKIDVHHGKRPLEKDDEEEVIIRKSFKNSDDELL---DTALTLG------- 152
           NW+ M++RV+K +    KRPLE D EEE+ +  +  N +D  L   D +   G       
Sbjct: 22  NWSYMTYRVEKKE----KRPLEIDAEEELQVEDA--NGNDLTLSPEDQSHKQGPPEDESD 75

Query: 153 ----SISKALVETAGNQQYAGDNSDSSSLIHNIGRDNSISCLIRCSRSDYGAIAS 305
               ++S +L + + +Q  A  NSD  SLI  IGRD SISCLIRCSRSDYG IAS
Sbjct: 76  KPGINLSLSLADQSNSQHQAEFNSDLDSLIQPIGRDLSISCLIRCSRSDYGFIAS 130


>ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6   WACMSFRVDKIDVHHGKRPLEKDDEEEVIIRKSFKNSD-DELLDTALTLGSISKALVETA 182
           W   SF V  +++   KR LE   EEE ++ KS K SD  E  +T  ++  +S + V  A
Sbjct: 23  WIYNSFCV--MELASNKRRLEL--EEEAVLTKSCKLSDAPEKGETKKSIQDLSLS-VNQA 77

Query: 183 GNQQYAGDNSDSSSLIHNIGRDNSISCLIRCSRSDYGAIAS 305
             Q ++ D SDSSSLI  +GRD SI+CL+RCSRSDYG++AS
Sbjct: 78  NAQNHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSVAS 118


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