BLASTX nr result

ID: Lithospermum22_contig00024163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024163
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301611.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_002535144.1| dicer-1, putative [Ricinus communis] gi|2235...   193   4e-47
ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicag...   192   1e-46
ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicag...   186   5e-45
ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-lik...   185   1e-44

>ref|XP_002301611.1| predicted protein [Populus trichocarpa] gi|222843337|gb|EEE80884.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  194 bits (493), Expect = 3e-47
 Identities = 94/181 (51%), Positives = 128/181 (70%), Gaps = 5/181 (2%)
 Frame = +2

Query: 128 TKAGKGGAKDSFQNEKEAWASA-----TKNVAEIEEILGYRFKNIKLLHEAFTHPSYGEH 292
           T     G K+S  +  E  +         ++ E+EEIL Y+FK+ KLL EA TH S+ + 
Sbjct: 24  TSESHKGTKESSDDRSEVASGKQTTDWVTDLDEVEEILHYKFKSKKLLEEALTHASFSDQ 83

Query: 293 YESYERLEYVGDSVLNLLITKQQFSTYPDLPPGLLSPLRAANVDTEKLGRVAINHNFHKY 472
             SYERLEYVGDSVLNLL TK+Q+  YPDLPPG L+ LR+ANVDTEKL RVAI H  H+Y
Sbjct: 84  CFSYERLEYVGDSVLNLLFTKEQYFLYPDLPPGPLTRLRSANVDTEKLARVAIKHKLHRY 143

Query: 473 ILHGKPIIEKRIQQFENALPRYPLHSHGMLNAPKVLADVVESTIGAIFIDTNSSIEMTWQ 652
           + H  P++E++I++F  A+  YPLHS+G++  PK LAD+VE+ IGA+FID+N SI++ W+
Sbjct: 144 LRHKMPLLEEQIREFSQAILDYPLHSNGLVETPKALADIVEAAIGAVFIDSNFSIDVVWK 203

Query: 653 V 655
           +
Sbjct: 204 I 204


>ref|XP_002535144.1| dicer-1, putative [Ricinus communis] gi|223523936|gb|EEF27239.1|
           dicer-1, putative [Ricinus communis]
          Length = 259

 Score =  193 bits (491), Expect = 4e-47
 Identities = 92/167 (55%), Positives = 127/167 (76%)
 Frame = +2

Query: 152 KDSFQNEKEAWASATKNVAEIEEILGYRFKNIKLLHEAFTHPSYGEHYESYERLEYVGDS 331
           KD     +EA ++ + ++  +EEIL Y+FKN  LL EAFT  S+     SYERLE+VGDS
Sbjct: 15  KDIETELEEAESNQSPSLDGVEEILKYKFKNRSLLEEAFTDSSFPGKCFSYERLEHVGDS 74

Query: 332 VLNLLITKQQFSTYPDLPPGLLSPLRAANVDTEKLGRVAINHNFHKYILHGKPIIEKRIQ 511
           VLNLL TK+ +  YP+LPPG L+ LRAANVDTEKL RVA+ H FH+++ H KP++E++I+
Sbjct: 75  VLNLLFTKEHYFKYPNLPPGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIR 134

Query: 512 QFENALPRYPLHSHGMLNAPKVLADVVESTIGAIFIDTNSSIEMTWQ 652
           +F  A+  YPLHS+G+++ PKVLAD+VES IGA+FID+NSS++  W+
Sbjct: 135 EFSQAILEYPLHSNGLVDVPKVLADIVESAIGAVFIDSNSSVDTVWK 181


>ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 565

 Score =  192 bits (487), Expect = 1e-46
 Identities = 94/150 (62%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
 Frame = +2

Query: 209 EIEEILGYRFKNIKLLHEAFTHPSYG-EHYESYERLEYVGDSVLNLLITKQQFSTYPDLP 385
           E+E IL Y FKN  LL EAFTH +YG E+  SYERLEYVGDSVLNL+ITK+QF  YP L 
Sbjct: 229 EVEAILEYEFKNKLLLEEAFTHGTYGAENGLSYERLEYVGDSVLNLMITKEQFQAYPTLA 288

Query: 386 PGLLSPLRAANVDTEKLGRVAINHNFHKYILHGKPIIEKRIQQFENALPRYPLHSHGMLN 565
           PG L+ LRAANVDTEKL RVAI H  H+Y+ H KP++  +IQ+F   +  YPLHS+G+++
Sbjct: 289 PGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEFTKGIAEYPLHSNGLID 348

Query: 566 APKVLADVVESTIGAIFIDTNSSIEMTWQV 655
            PK LAD+VESTIGAIF+D  SS+E  W+V
Sbjct: 349 VPKSLADIVESTIGAIFVDCGSSVETVWKV 378


>ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 783

 Score =  186 bits (473), Expect = 5e-45
 Identities = 92/149 (61%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
 Frame = +2

Query: 209 EIEEILGYRFKNIKLLHEAFTHPSYG-EHYESYERLEYVGDSVLNLLITKQQFSTYPDLP 385
           E+E IL Y FKNI LL EAFTH +YG E+  SYERLEY+GDSVLNL+IT +QF  YP L 
Sbjct: 446 EVEAILEYEFKNILLLEEAFTHCTYGAENGLSYERLEYIGDSVLNLMITTEQFHAYPTLA 505

Query: 386 PGLLSPLRAANVDTEKLGRVAINHNFHKYILHGKPIIEKRIQQFENALPRYPLHSHGMLN 565
           PG L+ LRAANVDTEKL RVAI +  H+Y+ H KP++   IQ F   +  YPLHS+G+++
Sbjct: 506 PGHLTRLRAANVDTEKLARVAIKYGLHRYVRHKKPLLGDEIQAFIKEVVEYPLHSNGLID 565

Query: 566 APKVLADVVESTIGAIFIDTNSSIEMTWQ 652
            PK+LAD+VESTIGAIF+D  SSIE  W+
Sbjct: 566 VPKILADIVESTIGAIFVDCGSSIETVWK 594


>ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
           gi|297739192|emb|CBI28843.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  185 bits (470), Expect = 1e-44
 Identities = 88/157 (56%), Positives = 118/157 (75%)
 Frame = +2

Query: 185 ASATKNVAEIEEILGYRFKNIKLLHEAFTHPSYGEHYESYERLEYVGDSVLNLLITKQQF 364
           A +  ++  +E+ILGY F N +LL EA+TH S  ++  SYERLE++GDSVL+LLITK+QF
Sbjct: 24  AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQF 83

Query: 365 STYPDLPPGLLSPLRAANVDTEKLGRVAINHNFHKYILHGKPIIEKRIQQFENALPRYPL 544
             YPDL PG L+ LR+ANVD EKL RVA+ H  H+++ H KP IE++I +F  A+  YPL
Sbjct: 84  FLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEYPL 143

Query: 545 HSHGMLNAPKVLADVVESTIGAIFIDTNSSIEMTWQV 655
           HS+G +  PKVLADVVESTIGA+F+D N S++  W+V
Sbjct: 144 HSNGQIEVPKVLADVVESTIGAVFVDCNCSVDTVWKV 180


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