BLASTX nr result

ID: Lithospermum22_contig00024158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024158
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283307.1| PREDICTED: psbP domain-containing protein 6,...   116   2e-24
emb|CAN83026.1| hypothetical protein VITISV_039682 [Vitis vinifera]   116   2e-24
ref|XP_002876377.1| thylakoid lumenal 20 kDa protein [Arabidopsi...   114   1e-23
ref|XP_003564431.1| PREDICTED: psbP domain-containing protein 6,...   112   2e-23
ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloropl...   112   2e-23

>ref|XP_002283307.1| PREDICTED: psbP domain-containing protein 6, chloroplastic [Vitis
           vinifera] gi|297741687|emb|CBI32819.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 377 EKLGSQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVASASDKQWQSSQKTLQAMLDS 198
           EKLG QTYYKYVLETP+ALTG+HNLAKATAKGN+VVLFVASA+DKQWQ+SQKTL+AMLDS
Sbjct: 202 EKLGDQTYYKYVLETPFALTGSHNLAKATAKGNSVVLFVASANDKQWQASQKTLKAMLDS 261

Query: 197 FQI 189
           FQ+
Sbjct: 262 FQV 264


>emb|CAN83026.1| hypothetical protein VITISV_039682 [Vitis vinifera]
          Length = 239

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 377 EKLGSQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVASASDKQWQSSQKTLQAMLDS 198
           EKLG QTYYKYVLETP+ALTG+HNLAKATAKGN+VVLFVASA+DKQWQ+SQKTL+AMLDS
Sbjct: 177 EKLGDQTYYKYVLETPFALTGSHNLAKATAKGNSVVLFVASANDKQWQASQKTLKAMLDS 236

Query: 197 FQI 189
           FQ+
Sbjct: 237 FQV 239


>ref|XP_002876377.1| thylakoid lumenal 20 kDa protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322215|gb|EFH52636.1| thylakoid lumenal 20 kDa
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/63 (84%), Positives = 61/63 (96%)
 Frame = -2

Query: 377 EKLGSQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVASASDKQWQSSQKTLQAMLDS 198
           EK+G QTYYKYVLETP+ALTG+HNLAKATAKGNTVVLFV SA++KQWQSSQKTL+A+LDS
Sbjct: 200 EKIGDQTYYKYVLETPFALTGSHNLAKATAKGNTVVLFVVSATEKQWQSSQKTLEAILDS 259

Query: 197 FQI 189
           FQ+
Sbjct: 260 FQL 262


>ref|XP_003564431.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
           [Brachypodium distachyon]
          Length = 279

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/63 (85%), Positives = 59/63 (93%)
 Frame = -2

Query: 377 EKLGSQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVASASDKQWQSSQKTLQAMLDS 198
           EK+G QTYY YVLETP ALTG+HNLAKATAKGNTVVLFVASASDKQWQSSQK L+AM+DS
Sbjct: 217 EKIGDQTYYSYVLETPLALTGSHNLAKATAKGNTVVLFVASASDKQWQSSQKILKAMVDS 276

Query: 197 FQI 189
           FQ+
Sbjct: 277 FQV 279


>ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534477|gb|EEF36178.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 260

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/61 (86%), Positives = 60/61 (98%)
 Frame = -2

Query: 377 EKLGSQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVASASDKQWQSSQKTLQAMLDS 198
           EKLG QTYYKYVLETPYALTGTHNLAKATAKG+TVVLFVASA+DKQWQ+S+KTL+A++DS
Sbjct: 198 EKLGDQTYYKYVLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKTLKAIIDS 257

Query: 197 F 195
           F
Sbjct: 258 F 258


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