BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024129
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631463.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...   147   1e-33
ref|NP_001119002.1| pentatricopeptide repeat-containing protein ...   142   3e-32
ref|XP_004148385.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32

>ref|XP_003631463.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Vitis vinifera]
          Length = 486

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 7/143 (4%)
 Frame = +1

Query: 1   IFHHMETSDTGTLLASNILIEVCQQ---LNANRS----LGSPDATVFNLVLDGCVKFRSS 159
           I  HM  ++ GT LASN L+++C     L+A++S    L  PD  +FNLVLD CV+F SS
Sbjct: 141 IILHMVKTEIGTYLASNYLVQICDHFLLLSASKSNHAKLIKPDTMIFNLVLDACVRFGSS 200

Query: 160 IKAQQIIELMAQVGIVADAYTIVMIAYIHEMNGMRDDLRKLQAHVDLVSTTLLSHYQHFY 339
            K QQIIELM QVG+ ADA++I++IA IHEMNG RDDL+K + H+D VS  L  HY+ FY
Sbjct: 201 FKGQQIIELMPQVGVGADAHSIIIIAQIHEMNGQRDDLKKFKCHIDQVSIQLACHYRQFY 260

Query: 340 DRLLCLHFKFNDIDAASALILDL 408
           D LL LHFKFNDID A+ L+LD+
Sbjct: 261 DSLLSLHFKFNDIDGAAGLVLDM 283


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/144 (47%), Positives = 105/144 (72%), Gaps = 7/144 (4%)
 Frame = +1

Query: 1   IFHHMETSDTGTLLASNILIEVCQ---QLNANRSLGS----PDATVFNLVLDGCVKFRSS 159
           +  HM  ++ G  LASN L+++C     L+A  S+ +    PDA +FNLVLD CVKF+SS
Sbjct: 186 VVSHMVKTEIGACLASNFLVQMCDCFLHLSAKGSVRAKVVKPDAMIFNLVLDACVKFKSS 245

Query: 160 IKAQQIIELMAQVGIVADAYTIVMIAYIHEMNGMRDDLRKLQAHVDLVSTTLLSHYQHFY 339
           +K Q+I+ELM++ G++ADA+++++ + IHEMNG RD+++KL+ HVD V    + +Y  FY
Sbjct: 246 LKGQEIVELMSKAGVIADAHSVIIFSQIHEMNGQRDEIKKLKDHVDEVGAPFIGYYCQFY 305

Query: 340 DRLLCLHFKFNDIDAASALILDLY 411
           D LL LHFKF+DID+A+ L+LD++
Sbjct: 306 DSLLKLHFKFDDIDSAAQLLLDMH 329


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/143 (48%), Positives = 108/143 (75%), Gaps = 7/143 (4%)
 Frame = +1

Query: 1   IFHHMETSDTGTLLASNILIEVCQ---QLNANRSLGSP----DATVFNLVLDGCVKFRSS 159
           I  HM  ++ GT LASN LI++C+   +++ANR+  +     D  +FNLVL+GCV+F+SS
Sbjct: 176 IVFHMVKTEVGTCLASNFLIQICECLLRISANRNDHAKVIKLDTLIFNLVLEGCVRFKSS 235

Query: 160 IKAQQIIELMAQVGIVADAYTIVMIAYIHEMNGMRDDLRKLQAHVDLVSTTLLSHYQHFY 339
           +K Q+++E M++ GI+ADA+++V+IA I+EMNG+RD+++K + H+D VS   + HYQ  Y
Sbjct: 236 LKGQELVEWMSRTGIIADAHSVVIIAEIYEMNGLRDEIKKFKDHIDQVSAPFVCHYQQLY 295

Query: 340 DRLLCLHFKFNDIDAASALILDL 408
           + LL LHF+F+D+DAAS L+LD+
Sbjct: 296 EVLLNLHFEFDDLDAASELVLDM 318


>ref|NP_001119002.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635613|sp|B3H672.1|PP317_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g17616 gi|332658523|gb|AEE83923.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 674

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 9/142 (6%)
 Frame = +1

Query: 10  HMETSDTGTLLASNILIEVCQQL------NANRSLGS---PDATVFNLVLDGCVKFRSSI 162
           HM  ++ GT LASN L++VC +         N S G+   PD  +FNLVL  CV+F  S+
Sbjct: 172 HMVKTEIGTCLASNYLVQVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVLGSCVRFGFSL 231

Query: 163 KAQQIIELMAQVGIVADAYTIVMIAYIHEMNGMRDDLRKLQAHVDLVSTTLLSHYQHFYD 342
           K Q++IELMA+V +VADAY+IV+++ I+EMNGMRD+LRK + H+  V   LL HYQHF+D
Sbjct: 232 KGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFD 291

Query: 343 RLLCLHFKFNDIDAASALILDL 408
            LL L FKF+DI +A  L LD+
Sbjct: 292 NLLSLEFKFDDIGSAGRLALDM 313


>ref|XP_004148385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Cucumis sativus]
           gi|449530891|ref|XP_004172425.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g17616-like [Cucumis sativus]
          Length = 714

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/140 (50%), Positives = 99/140 (70%), Gaps = 7/140 (5%)
 Frame = +1

Query: 10  HMETSDTGTLLASNILIEVC-----QQLNANRSLGS--PDATVFNLVLDGCVKFRSSIKA 168
           HM  S+ GT LASNIL+++C     Q  + N    S  PD  +FNLVL  CV+F+ S K 
Sbjct: 203 HMVKSEVGTYLASNILVQICDCFLQQATSRNDQAKSMKPDTMLFNLVLHACVRFKLSFKG 262

Query: 169 QQIIELMAQVGIVADAYTIVMIAYIHEMNGMRDDLRKLQAHVDLVSTTLLSHYQHFYDRL 348
           QQ++ELM+Q  +VADA+TIV+IA I+EMN  RD+L+ L+ H+D VS +L+ HY  FYD L
Sbjct: 263 QQLVELMSQTEVVADAHTIVLIARIYEMNDQRDELKNLKTHIDQVSPSLVCHYCQFYDAL 322

Query: 349 LCLHFKFNDIDAASALILDL 408
           L LHFK++D D+A+ L+L++
Sbjct: 323 LSLHFKYDDFDSAANLMLEI 342