BLASTX nr result

ID: Lithospermum22_contig00024096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024096
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...    65   7e-09
emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]    65   7e-09
ref|XP_003553251.1| PREDICTED: F-box/kelch-repeat protein At3g27...    63   2e-08
ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27...    62   4e-08
ref|XP_002298618.1| f-box family protein [Populus trichocarpa] g...    59   5e-07

>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis
           vinifera]
          Length = 437

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
 Frame = -3

Query: 221 ADGILALLEPSQGNQDSSGE---------RPQDADYDSIGYSLSFELQALILARFPRLEY 69
           A G +  L+PS+ N  SSGE           QDADY S G SLS+E++ LILAR PR EY
Sbjct: 53  ARGTVRRLDPSR-NGFSSGECRVGSSSAVDTQDADY-SDGPSLSYEVEGLILARVPRSEY 110

Query: 68  WKLFFLDKRCVDLLKNSHLFKI 3
           WK  F++KR + LLK+  LFKI
Sbjct: 111 WKFCFVNKRYLTLLKSGELFKI 132


>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
 Frame = -3

Query: 221 ADGILALLEPSQGNQDSSGE---------RPQDADYDSIGYSLSFELQALILARFPRLEY 69
           A G +  L+PS+ N  SSGE           QDADY S G SLS+E++ LILAR PR EY
Sbjct: 130 ARGTVRRLDPSR-NGFSSGECRVGSSSAVDTQDADY-SDGPSLSYEVEGLILARVPRSEY 187

Query: 68  WKLFFLDKRCVDLLKNSHLFKI 3
           WK  F++KR + LLK+  LFKI
Sbjct: 188 WKFCFVNKRYLTLLKSGELFKI 209


>ref|XP_003553251.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 375

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 200 LEPSQGNQDSSGER---PQDADYDSIGYSLSFELQALILARFPRLEYWKLFFLDKRCVDL 30
           L PS GN  S+ E    PQDADY ++  SLS EL+  ILARFPR ++WKL FL+KR + L
Sbjct: 6   LSPSDGNGSSTNEDEPLPQDADYINV-LSLSDELETSILARFPRSQHWKLCFLNKRFLAL 64

Query: 29  LKNSHLFKI 3
            ++  ++KI
Sbjct: 65  SRSGEIYKI 73


>ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 404

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
 Frame = -3

Query: 200 LEPSQGNQDSSG---ERPQDADYDSIGYSLSFELQALILARFPRLEYWKLFFLDKRCVDL 30
           L PS GN  S+      PQDADY ++  SLS EL+  ILARFPR ++WKL FL+KR + L
Sbjct: 32  LSPSDGNGSSTNGDEPLPQDADYSNV-LSLSDELETSILARFPRSQHWKLCFLNKRFLAL 90

Query: 29  LKNSHLFKI 3
            ++  ++KI
Sbjct: 91  ARSGEIYKI 99


>ref|XP_002298618.1| f-box family protein [Populus trichocarpa]
           gi|222845876|gb|EEE83423.1| f-box family protein
           [Populus trichocarpa]
          Length = 390

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/58 (55%), Positives = 39/58 (67%)
 Frame = -3

Query: 176 DSSGERPQDADYDSIGYSLSFELQALILARFPRLEYWKLFFLDKRCVDLLKNSHLFKI 3
           DSS  +PQD DY S    LS EL+ LILAR PR EYWK   ++KR + L+K+  LFKI
Sbjct: 28  DSSNVKPQDTDY-SYAPQLSDELENLILARVPRSEYWKFPNVNKRILSLVKSGELFKI 84


Top