BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024078
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   303   2e-80
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   207   2e-51
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     202   7e-50
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   200   3e-49
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   200   3e-49

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  303 bits (776), Expect = 2e-80
 Identities = 143/243 (58%), Positives = 180/243 (74%), Gaps = 3/243 (1%)
 Frame = -1

Query: 721  FWAEAVNTACYLINRGPHTGINLKTPIELWSNKSADYTGLRVFGCTAYYHVNEGKLEPRA 542
            FWAEAV+TACYLINRGPHTGI  KTP+E+WS K+ADY+ L+ FGCTAYYHV+EGKLEPRA
Sbjct: 598  FWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRA 657

Query: 541  KKGIFVGYGDGVKGYRIWSSSERRVILSRNVIFDENSMFRSTITPIISEAEGGVGKQVEH 362
            KKG+FVGYGDGVKG+RIWS +E+RVI+SRNV+FDE+ + R+ + P  +   G + KQVE 
Sbjct: 658  KKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEF 717

Query: 361  RDSGVNGDGXXXXXXXXXXXXXXEVPS---PDEHHSLALDRPRRANYGVPPSRYGYEDML 191
            +      D               ++P     D H S+A DRPRR     PP+RYG+EDM+
Sbjct: 718  QVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVR-PPTRYGFEDMV 776

Query: 190  AFALQVAEEVDPHEPVSYREAVTGTKSVQWLAAMGEEMESLHKNQTWELARRPAGRKIVT 11
             +ALQVAEEVD  EP +Y+EA+  + S +W AAMG+EMESLHKNQTW+L  +P+GRKI+T
Sbjct: 777  GYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIIT 836

Query: 10   CKW 2
            CKW
Sbjct: 837  CKW 839


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  207 bits (526), Expect = 2e-51
 Identities = 115/249 (46%), Positives = 152/249 (61%), Gaps = 9/249 (3%)
 Frame = -1

Query: 721  FWAEAVNTACYLINRGPHTGINLKTPIELWSNKSADYTGLRVFGCTAYYHVNEGKLEPRA 542
            FWAEAV+TACYLINR P   I+ KTPIE+WS   A+Y+ LRVFGCTAY HV+ GKLEPRA
Sbjct: 827  FWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRA 886

Query: 541  KKGIFVGYGDGVKGYRIWSSSERRVILSRNVIFDENSMFR---STITPIISEAEGGVGKQ 371
             K IF+GY  GVKGY++W    ++V++SRNV+F E+ M     ST  P+ S+ +  V  Q
Sbjct: 887  IKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASV--Q 944

Query: 370  VEHRDSGVNG----DGXXXXXXXXXXXXXXEVPSPDEHHSLALDRPRRANYGVPPSRYGY 203
            VEH  S  +     D                +       S+A DRP+R     PP RY  
Sbjct: 945  VEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNI--KPPQRYIE 1002

Query: 202  E-DMLAFALQVAEEVDPH-EPVSYREAVTGTKSVQWLAAMGEEMESLHKNQTWELARRPA 29
            E +++A+AL VAEE++ + EP +Y EA+      +W+ AM +EMESL KN TWEL + P 
Sbjct: 1003 EANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPK 1062

Query: 28   GRKIVTCKW 2
             +K + CKW
Sbjct: 1063 EKKPIRCKW 1071


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  202 bits (513), Expect = 7e-50
 Identities = 112/249 (44%), Positives = 151/249 (60%), Gaps = 9/249 (3%)
 Frame = -1

Query: 721  FWAEAVNTACYLINRGPHTGINLKTPIELWSNKSADYTGLRVFGCTAYYHVNEGKLEPRA 542
            FWAEAV+TACYLINR P   I+ KTPIE+WS   A+Y+ LRVFGCTAY HV+ GKLEPR 
Sbjct: 529  FWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRV 588

Query: 541  KKGIFVGYGDGVKGYRIWSSSERRVILSRNVIFDENSMFR---STITPIISEAEGGVGKQ 371
             K IF+GY  GVKGY++W    ++V++SRNV+F E+ M     ST  P+  E++  V  Q
Sbjct: 589  IKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVPV--ESQEKVSVQ 646

Query: 370  VEHRDSGVNG----DGXXXXXXXXXXXXXXEVPSPDEHHSLALDRPRRANYGVPPSRYGY 203
            VEH  S  +     D                +       S+A DRP+R     PP RY  
Sbjct: 647  VEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNT--KPPRRYIE 704

Query: 202  E-DMLAFALQVAEEVDPH-EPVSYREAVTGTKSVQWLAAMGEEMESLHKNQTWELARRPA 29
            E +++A+AL VAEE++ + EP +Y +A+      +W+ AM +EMESL KN +WEL + P 
Sbjct: 705  EANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPK 764

Query: 28   GRKIVTCKW 2
             +K + CKW
Sbjct: 765  EKKPIRCKW 773


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  200 bits (508), Expect = 3e-49
 Identities = 114/252 (45%), Positives = 151/252 (59%), Gaps = 12/252 (4%)
 Frame = -1

Query: 721  FWAEAVNTACYLINRGPHTGINLKTPIELWSNKSADYTGLRVFGCTAYYHVNEGKLEPRA 542
            FWAEAVNTA YL+NR P T I+ KTP E+WS K ++Y+GL++FGC AY HV++GKLEPRA
Sbjct: 719  FWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRA 778

Query: 541  KKGIFVGYGDGVKGYRIWSSSER--RVILSRNVIFDENSMF--RSTITPI--ISEAEGGV 380
             K IF+GY  GVKGYR+W + +R  + I+SR+V FDE++MF  R     +   S+ + G 
Sbjct: 779  MKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSKTDLGA 838

Query: 379  GKQVEHRDSGVNGDGXXXXXXXXXXXXXXEVPSPDEHHSLALDRPRRANYGVPPSRY--- 209
             ++VE        +G               V   ++  S+A  RPRR      P RY   
Sbjct: 839  NQKVEFEVDAPMENG------VDDTSEEQPVIDQNDSQSIAAHRPRREIR--RPMRYVDC 890

Query: 208  ---GYEDMLAFALQVAEEVDPHEPVSYREAVTGTKSVQWLAAMGEEMESLHKNQTWELAR 38
                  + +AFAL VAEE+   EP SY+EA+    S +WL++M +EM SL KNQTWEL  
Sbjct: 891  VSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVP 950

Query: 37   RPAGRKIVTCKW 2
             P G K V CKW
Sbjct: 951  LPEGVKPVDCKW 962


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  200 bits (508), Expect = 3e-49
 Identities = 114/252 (45%), Positives = 151/252 (59%), Gaps = 12/252 (4%)
 Frame = -1

Query: 721  FWAEAVNTACYLINRGPHTGINLKTPIELWSNKSADYTGLRVFGCTAYYHVNEGKLEPRA 542
            FWAEAVNTA YL+NR P T I+ KTP E+WS K ++Y+GL++FGC AY HV++GKLEPRA
Sbjct: 932  FWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRA 991

Query: 541  KKGIFVGYGDGVKGYRIWSSSER--RVILSRNVIFDENSMF--RSTITPI--ISEAEGGV 380
             K IF+GY  GVKGYR+W + +R  + I+SR+V FDE++MF  R     +   S+ + G 
Sbjct: 992  MKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSKTDLGA 1051

Query: 379  GKQVEHRDSGVNGDGXXXXXXXXXXXXXXEVPSPDEHHSLALDRPRRANYGVPPSRY--- 209
             ++VE        +G               V   ++  S+A  RPRR      P RY   
Sbjct: 1052 NQKVEFEVDAPMENG------VDDTSEEQPVIDQNDSQSIAAXRPRREIR--RPMRYVDC 1103

Query: 208  ---GYEDMLAFALQVAEEVDPHEPVSYREAVTGTKSVQWLAAMGEEMESLHKNQTWELAR 38
                  + +AFAL VAEE+   EP SY+EA+    S +WL++M +EM SL KNQTWEL  
Sbjct: 1104 VSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVP 1163

Query: 37   RPAGRKIVTCKW 2
             P G K V CKW
Sbjct: 1164 LPEGVKPVDCKW 1175