BLASTX nr result

ID: Lithospermum22_contig00024056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024056
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   144   6e-33
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               72   1e-19
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...    91   1e-16
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu...    91   1e-16
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...    71   8e-11

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = -3

Query: 385 GSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWPRADL 206
           GSARESAGNNRKEGVHVAA  APFLVNGAQQVRHLLQKRESTSDNH SARQRVEWPRADL
Sbjct: 87  GSARESAGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSARQRVEWPRADL 146

Query: 205 FGYIIQVESRVTGTAV 158
           FGYIIQVESRVTG AV
Sbjct: 147 FGYIIQVESRVTGKAV 162


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 72.0 bits (175), Expect(2) = 1e-19
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -2

Query: 386 RLGPGKRWQQQKGRGPCSCCARPLLSQWGT 297
           RLGPGKRWQQQKGRGPCSCCARPLLSQWG+
Sbjct: 194 RLGPGKRWQQQKGRGPCSCCARPLLSQWGS 223



 Score = 48.9 bits (115), Expect(2) = 1e-19
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = -1

Query: 297 SRFGIYYKRENPLQITTPLLGS 232
           SRFGIYYKRENPLQITTPLLGS
Sbjct: 223 SRFGIYYKRENPLQITTPLLGS 244


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 63/134 (47%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 GSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWPRADL 206
           GSARESAGNNRKEGVHVAAA APFLVN A       ++R      +ASA        +DL
Sbjct: 82  GSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDL 141

Query: 205 FGYIIQVESRVTGTAV*WKXXXXXXXXXXXFVENSSFPFV*IPQ------RRILNLWGPI 44
           FGYIIQVES VTGTA                V+ + F    +         RI N WGP 
Sbjct: 142 FGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQNFWGPS 195

Query: 43  YSISRAPKKTPLPF 2
              S +P KTPLPF
Sbjct: 196 IP-SSSPAKTPLPF 208


>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 464

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 63/134 (47%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 GSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWPRADL 206
           GSARESAGNNRKEGVHVAAA APFLVN A       ++R      +ASA        +DL
Sbjct: 31  GSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDL 90

Query: 205 FGYIIQVESRVTGTAV*WKXXXXXXXXXXXFVENSSFPFV*IPQ------RRILNLWGPI 44
           FGYIIQVES VTGTA                V+ + F    +         RI N WGP 
Sbjct: 91  FGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQNFWGPS 144

Query: 43  YSISRAPKKTPLPF 2
              S +P KTPLPF
Sbjct: 145 IP-SSSPAKTPLPF 157


>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
           chain 2-like, partial [Cucumis sativus]
          Length = 472

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = -1

Query: 126 RALFSLRIPRSLSCEFPSGEF*TCGALSIRSLEPRRKPPSPS 1
           RALFSL IPRSLSC FPSGEF TCGALSI SL+PR KPP PS
Sbjct: 44  RALFSLIIPRSLSCSFPSGEFETCGALSIPSLKPRXKPPLPS 85


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