BLASTX nr result
ID: Lithospermum22_contig00024054
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00024054 (630 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 188 6e-46 emb|CBI19566.3| unnamed protein product [Vitis vinifera] 188 6e-46 ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 188 6e-46 ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2... 186 2e-45 ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ... 182 6e-44 >ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 1 [Vitis vinifera] Length = 409 Score = 188 bits (478), Expect = 6e-46 Identities = 92/131 (70%), Positives = 104/131 (79%), Gaps = 3/131 (2%) Frame = -1 Query: 630 IFVGGLDPNVSDEDLRQPFSNYGEIVSVKIPIGRGCGFVQFANRSDAEEALQKLNGTVIG 451 IFVGGLDPNVSDEDLRQPFS YGEIVSVKIP+G+GCGFVQFANR++AE+ALQKLNGTVIG Sbjct: 281 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIG 340 Query: 450 KQSVRLSWGRNQGNKHIRADYG---TGAYYGRHVYEGYGYPMPPPHDPIXXXXXXXXXXX 280 KQ+VRLSWGRN NK +RAD+G +GAYYG VY+GYGY +PPPHDP Sbjct: 341 KQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPV 400 Query: 279 XATHPHQQQVN 247 HQQQV+ Sbjct: 401 YGN--HQQQVS 409 >emb|CBI19566.3| unnamed protein product [Vitis vinifera] Length = 324 Score = 188 bits (478), Expect = 6e-46 Identities = 92/131 (70%), Positives = 104/131 (79%), Gaps = 3/131 (2%) Frame = -1 Query: 630 IFVGGLDPNVSDEDLRQPFSNYGEIVSVKIPIGRGCGFVQFANRSDAEEALQKLNGTVIG 451 IFVGGLDPNVSDEDLRQPFS YGEIVSVKIP+G+GCGFVQFANR++AE+ALQKLNGTVIG Sbjct: 196 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIG 255 Query: 450 KQSVRLSWGRNQGNKHIRADYG---TGAYYGRHVYEGYGYPMPPPHDPIXXXXXXXXXXX 280 KQ+VRLSWGRN NK +RAD+G +GAYYG VY+GYGY +PPPHDP Sbjct: 256 KQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPV 315 Query: 279 XATHPHQQQVN 247 HQQQV+ Sbjct: 316 YGN--HQQQVS 324 >ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 2 [Vitis vinifera] Length = 418 Score = 188 bits (478), Expect = 6e-46 Identities = 92/131 (70%), Positives = 104/131 (79%), Gaps = 3/131 (2%) Frame = -1 Query: 630 IFVGGLDPNVSDEDLRQPFSNYGEIVSVKIPIGRGCGFVQFANRSDAEEALQKLNGTVIG 451 IFVGGLDPNVSDEDLRQPFS YGEIVSVKIP+G+GCGFVQFANR++AE+ALQKLNGTVIG Sbjct: 290 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIG 349 Query: 450 KQSVRLSWGRNQGNKHIRADYG---TGAYYGRHVYEGYGYPMPPPHDPIXXXXXXXXXXX 280 KQ+VRLSWGRN NK +RAD+G +GAYYG VY+GYGY +PPPHDP Sbjct: 350 KQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPV 409 Query: 279 XATHPHQQQVN 247 HQQQV+ Sbjct: 410 YGN--HQQQVS 418 >ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa] Length = 429 Score = 186 bits (473), Expect = 2e-45 Identities = 91/132 (68%), Positives = 103/132 (78%), Gaps = 4/132 (3%) Frame = -1 Query: 630 IFVGGLDPNVSDEDLRQPFSNYGEIVSVKIPIGRGCGFVQFANRSDAEEALQKLNGTVIG 451 IFVGGLDPNV+DEDL+QPFS YGEIVSVKIP+G+GCGFVQFANR +AEEALQKLNGTVIG Sbjct: 298 IFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIG 357 Query: 450 KQSVRLSWGRNQGNKHIRADYGT---GAYYGRHVYEGYGYPMPPPHDPIXXXXXXXXXXX 280 KQ+VRLSWGRN NK RAD+G+ GAYYG VY+GYGY +PPPHDP Sbjct: 358 KQTVRLSWGRNPANKQFRADFGSPWNGAYYGGQVYDGYGYALPPPHDPSMYAAAAAAYGA 417 Query: 279 XATH-PHQQQVN 247 + HQQQV+ Sbjct: 418 YPIYGSHQQQVS 429 >ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like [Glycine max] Length = 401 Score = 182 bits (461), Expect = 6e-44 Identities = 85/108 (78%), Positives = 94/108 (87%), Gaps = 3/108 (2%) Frame = -1 Query: 630 IFVGGLDPNVSDEDLRQPFSNYGEIVSVKIPIGRGCGFVQFANRSDAEEALQKLNGTVIG 451 IFVGGLDPNVSDEDLRQPFS YGEIVSVKIP+G+GCGFVQFANR++AEEALQKLNGT IG Sbjct: 273 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIG 332 Query: 450 KQSVRLSWGRNQGNKHIRADYG---TGAYYGRHVYEGYGYPMPPPHDP 316 KQ+VRLSWGRN NK R D+G TGAYYG +Y+GYGY +PP HDP Sbjct: 333 KQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDP 380