BLASTX nr result

ID: Lithospermum22_contig00024025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024025
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   327   3e-87
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   327   3e-87
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   310   5e-82
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   305   1e-80

>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus] gi|449504088|ref|XP_004162249.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  327 bits (838), Expect = 3e-87
 Identities = 148/191 (77%), Positives = 172/191 (90%)
 Frame = -1

Query: 1071 HGNIDLGVEAAEKLFHLIPQHDGTYMLLANMFATAGRYGDVAKVRLLMRERGVKKEPGCS 892
            HGN+DLG+EAAEKLF LIPQHDGTY+LL+NM+A+ GR+ DVA+ R LMR+RGVKKEP CS
Sbjct: 607  HGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACS 666

Query: 891  WIEVENRVHVFLVDDAVHPDIIVIYNYLRELMQKIKAAGYIPDTKFVLHDMESEHKEYAL 712
            W EVEN+VHVFLVDD VHP+++ IYNYL +L  ++K  GYIPDTK+VLHDMESEHKEYAL
Sbjct: 667  WTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYAL 726

Query: 711  SMHSEKLAVVYGLLKLPRGATIRVFKNLRICGDCHNAIKFMSKVEARDIIVRDGKRFHHF 532
            S HSEKLAV +GL+KLP+GAT+RVFKNLRICGDCHNAIKFMSKV  R+I+VRDGKRFHHF
Sbjct: 727  STHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHF 786

Query: 531  KDGECSCGNYW 499
            K+GECSC NYW
Sbjct: 787  KNGECSCRNYW 797


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
            [Vitis vinifera]
          Length = 799

 Score =  327 bits (838), Expect = 3e-87
 Identities = 149/191 (78%), Positives = 171/191 (89%)
 Frame = -1

Query: 1071 HGNIDLGVEAAEKLFHLIPQHDGTYMLLANMFATAGRYGDVAKVRLLMRERGVKKEPGCS 892
            HGN+DLG++AAE+LF L+PQHDGTY+LL+NM+AT GR+ DVAKVR LMR++GVKKEPGCS
Sbjct: 609  HGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCS 668

Query: 891  WIEVENRVHVFLVDDAVHPDIIVIYNYLRELMQKIKAAGYIPDTKFVLHDMESEHKEYAL 712
            WIEVEN+VHVFLVDD VHP++  +YNYL EL  K++  GYIPDTKFVLHDMESE KEY L
Sbjct: 669  WIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVL 728

Query: 711  SMHSEKLAVVYGLLKLPRGATIRVFKNLRICGDCHNAIKFMSKVEARDIIVRDGKRFHHF 532
            S HSEKLAV +GLLKLP GAT+RVFKNLRICGDCHNA KFMSKV  R+I+VRDGKRFHHF
Sbjct: 729  STHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHF 788

Query: 531  KDGECSCGNYW 499
            K+GECSCGNYW
Sbjct: 789  KNGECSCGNYW 799


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479792|gb|AES60995.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  310 bits (793), Expect = 5e-82
 Identities = 137/191 (71%), Positives = 170/191 (89%)
 Frame = -1

Query: 1071 HGNIDLGVEAAEKLFHLIPQHDGTYMLLANMFATAGRYGDVAKVRLLMRERGVKKEPGCS 892
            HGN++LG++AA++L  LIP  DGTY++L+NM+A  G++ +VA+VRLLMRERGVKKEPGCS
Sbjct: 605  HGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCS 664

Query: 891  WIEVENRVHVFLVDDAVHPDIIVIYNYLRELMQKIKAAGYIPDTKFVLHDMESEHKEYAL 712
            W+EVEN VHVFLVDDA HP++  +Y YL++L+ ++K  GY+PDTKFVLHDMESEHKE++L
Sbjct: 665  WVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSL 724

Query: 711  SMHSEKLAVVYGLLKLPRGATIRVFKNLRICGDCHNAIKFMSKVEARDIIVRDGKRFHHF 532
            S HSEKLAVVYG++KLP GATIRVFKNLRICGDCHNA K++SKV  R+I+VRD KRFHHF
Sbjct: 725  STHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHF 784

Query: 531  KDGECSCGNYW 499
            K+GECSCGNYW
Sbjct: 785  KNGECSCGNYW 795


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
            predicted protein [Populus trichocarpa]
          Length = 797

 Score =  308 bits (789), Expect = 1e-81
 Identities = 139/191 (72%), Positives = 167/191 (87%)
 Frame = -1

Query: 1071 HGNIDLGVEAAEKLFHLIPQHDGTYMLLANMFATAGRYGDVAKVRLLMRERGVKKEPGCS 892
            HGNIDLG+EAAE+LF L PQHDGTY+LL+NM+A AG++ D+AKVR LMR+RGVKKEPGCS
Sbjct: 607  HGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCS 666

Query: 891  WIEVENRVHVFLVDDAVHPDIIVIYNYLRELMQKIKAAGYIPDTKFVLHDMESEHKEYAL 712
            WIEVEN+VH FLV DA HP++  IYNYL +L+ +++  GY+PDTK VLHD+ES+ KE+ L
Sbjct: 667  WIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHEL 726

Query: 711  SMHSEKLAVVYGLLKLPRGATIRVFKNLRICGDCHNAIKFMSKVEARDIIVRDGKRFHHF 532
            S HSEKLAV YG +KLP GAT+RVFKNLRICGDCHNA KFMSKV  R+I+VRDGKRFHHF
Sbjct: 727  STHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHF 786

Query: 531  KDGECSCGNYW 499
            +DG+CSCG+YW
Sbjct: 787  RDGKCSCGDYW 797


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Glycine max]
          Length = 782

 Score =  305 bits (782), Expect = 1e-80
 Identities = 137/191 (71%), Positives = 167/191 (87%)
 Frame = -1

Query: 1071 HGNIDLGVEAAEKLFHLIPQHDGTYMLLANMFATAGRYGDVAKVRLLMRERGVKKEPGCS 892
            HGN++LG++AA++L  L+PQ DGTY+ L+NM+A  G++ +VA+VR LMRERGVKKEPGCS
Sbjct: 592  HGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCS 651

Query: 891  WIEVENRVHVFLVDDAVHPDIIVIYNYLRELMQKIKAAGYIPDTKFVLHDMESEHKEYAL 712
            WIEVEN VHVFLVDDAVHP++  +Y YL +L+ +++  GY+PDTKFVLHDMESE KEYAL
Sbjct: 652  WIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYAL 711

Query: 711  SMHSEKLAVVYGLLKLPRGATIRVFKNLRICGDCHNAIKFMSKVEARDIIVRDGKRFHHF 532
            S HSEKLAVVYG++KLP GATIRVFKNLRICGDCHNA K++SKV  R+IIVRD KRFHHF
Sbjct: 712  STHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHF 771

Query: 531  KDGECSCGNYW 499
            ++GECSC NYW
Sbjct: 772  RNGECSCSNYW 782


Top