BLASTX nr result

ID: Lithospermum22_contig00023975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023975
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...    64   2e-08
emb|CBI41034.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...    64   2e-08
ref|XP_003566293.1| PREDICTED: RNA polymerase II C-terminal doma...    62   1e-07
emb|CBI35709.3| unnamed protein product [Vitis vinifera]               61   2e-07

>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   RWAVNQKKFLVHPRWIEASNYFWRKPPEKEFPYNHGK 113
           RWA+ +KKFLVHP WIEA+NYFW+K PE+ FP N  K
Sbjct: 240 RWALQEKKFLVHPGWIEAANYFWQKQPEENFPVNQKK 276


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   RWAVNQKKFLVHPRWIEASNYFWRKPPEKEFPYNHGK 113
           RWA+ +KKFLVHP WIEA+NYFW+K PE+ FP N  K
Sbjct: 226 RWALQEKKFLVHPGWIEAANYFWQKQPEENFPVNQKK 262


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   RWAVNQKKFLVHPRWIEASNYFWRKPPEKEFPYNHGK 113
           RWA+ +KKFLVHP WIEA+NYFW+K PE+ FP N  K
Sbjct: 240 RWALQEKKFLVHPGWIEAANYFWQKQPEENFPVNQKK 276


>ref|XP_003566293.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Brachypodium distachyon]
          Length = 492

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   RWAVNQKKFLVHPRWIEASNYFWRKPPEKEFP 98
           RWAV  KKFL+HPRWIEASNY WR+ PE++FP
Sbjct: 436 RWAVENKKFLLHPRWIEASNYRWRRQPEEDFP 467


>emb|CBI35709.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   RWAVNQKKFLVHPRWIEASNYFWRKPPEKEFP 98
           RWA+ +KKFLVHP WIEA+NYFW+K PE+ FP
Sbjct: 226 RWALQEKKFLVHPGWIEAANYFWQKQPEENFP 257


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