BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023936
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   264   e-114
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              264   e-114
ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   263   e-112
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   250   e-105
ref|NP_197043.1| tRNA/rRNA methyltransferase (SpoU) family prote...   246   e-102

>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
           vinifera]
          Length = 372

 Score =  264 bits (675), Expect(2) = e-114
 Identities = 126/159 (79%), Positives = 144/159 (90%)
 Frame = -2

Query: 745 RYRDNRHVSMGAEKWLDIELWDSIQECFKHLKLRGYRIATTHLHKDTVSVYDMDWSCPTA 566
           RY+DNRHVSMGAEKWLDIELW+S QECF+ LK RGYRIATTH+  D VS+YDMDW+CPTA
Sbjct: 214 RYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTA 273

Query: 565 IVVGNENKGISDEALQLSDLHCSIPMRGMVDSFNVSVAAGLLMHHAIRDRTSRMGSHGDL 386
           IVVGNEN+GISDEAL+LSDLHCSIPM+GMVDSFNVSVAAG+LMHHA+ DRTSR+GSHGDL
Sbjct: 274 IVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDL 333

Query: 385 TKEESQILLAEFFLRHSGTTTSIANEYAKRKLAAATSKL 269
           + EES+ILLAEF LRHS +  SIA+E+AKRK A+  SKL
Sbjct: 334 SLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 372



 Score =  175 bits (444), Expect(2) = e-114
 Identities = 111/215 (51%), Positives = 134/215 (62%), Gaps = 33/215 (15%)
 Frame = -1

Query: 1343 SGCKTLARSSFSLLYYN-----------------------TSIQFS--LRPYSSHSGIKL 1239
            S CKTL R S S L ++                       +S++F+  L P SS S + L
Sbjct: 5    SACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSIS-LGL 63

Query: 1238 QQCKKATRCCFSTAAAISAE---LSEDLNKDTVEDLLVKKKDVGRLMKMERKHELEFCSN 1068
             + K  +R     A ++  E   L +D NKD VE LL    DVGRLMKMER+       +
Sbjct: 64   TRHKLHSRPYVHVAESVGVETTDLEDDSNKDIVEHLLTNTDDVGRLMKMERR---SMTGD 120

Query: 1067 G-----SKHWFPYLDKFTVLSGDYLNSAEVLEAVDPYIMDMRKERFRNAVKNRSYSVCLV 903
            G     SK WFPYLDKF      +L+S+E+LEA+DPYIM++RKERFRN VK+RSYSVCLV
Sbjct: 121  GGELIQSKRWFPYLDKFKT-GTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLV 179

Query: 902  VEGLADFGNVSAAFRSADAMGIQSVHVVSCDSSKR 798
            VEGL DFGNVSAAFRSADA+G QSVHVVSCDSSKR
Sbjct: 180  VEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKR 214


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  264 bits (675), Expect(2) = e-114
 Identities = 126/159 (79%), Positives = 144/159 (90%)
 Frame = -2

Query: 745 RYRDNRHVSMGAEKWLDIELWDSIQECFKHLKLRGYRIATTHLHKDTVSVYDMDWSCPTA 566
           RY+DNRHVSMGAEKWLDIELW+S QECF+ LK RGYRIATTH+  D VS+YDMDW+CPTA
Sbjct: 211 RYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTA 270

Query: 565 IVVGNENKGISDEALQLSDLHCSIPMRGMVDSFNVSVAAGLLMHHAIRDRTSRMGSHGDL 386
           IVVGNEN+GISDEAL+LSDLHCSIPM+GMVDSFNVSVAAG+LMHHA+ DRTSR+GSHGDL
Sbjct: 271 IVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDL 330

Query: 385 TKEESQILLAEFFLRHSGTTTSIANEYAKRKLAAATSKL 269
           + EES+ILLAEF LRHS +  SIA+E+AKRK A+  SKL
Sbjct: 331 SLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 369



 Score =  175 bits (444), Expect(2) = e-114
 Identities = 111/215 (51%), Positives = 134/215 (62%), Gaps = 33/215 (15%)
 Frame = -1

Query: 1343 SGCKTLARSSFSLLYYN-----------------------TSIQFS--LRPYSSHSGIKL 1239
            S CKTL R S S L ++                       +S++F+  L P SS S + L
Sbjct: 2    SACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSIS-LGL 60

Query: 1238 QQCKKATRCCFSTAAAISAE---LSEDLNKDTVEDLLVKKKDVGRLMKMERKHELEFCSN 1068
             + K  +R     A ++  E   L +D NKD VE LL    DVGRLMKMER+       +
Sbjct: 61   TRHKLHSRPYVHVAESVGVETTDLEDDSNKDIVEHLLTNTDDVGRLMKMERR---SMTGD 117

Query: 1067 G-----SKHWFPYLDKFTVLSGDYLNSAEVLEAVDPYIMDMRKERFRNAVKNRSYSVCLV 903
            G     SK WFPYLDKF      +L+S+E+LEA+DPYIM++RKERFRN VK+RSYSVCLV
Sbjct: 118  GGELIQSKRWFPYLDKFKT-GTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLV 176

Query: 902  VEGLADFGNVSAAFRSADAMGIQSVHVVSCDSSKR 798
            VEGL DFGNVSAAFRSADA+G QSVHVVSCDSSKR
Sbjct: 177  VEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKR 211


>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
           gi|223527332|gb|EEF29478.1| rRNA methylase, putative
           [Ricinus communis]
          Length = 334

 Score =  263 bits (671), Expect(2) = e-112
 Identities = 127/159 (79%), Positives = 140/159 (88%)
 Frame = -2

Query: 745 RYRDNRHVSMGAEKWLDIELWDSIQECFKHLKLRGYRIATTHLHKDTVSVYDMDWSCPTA 566
           RYRDNRHVSMGAEKWLDIELWDS QECF+ LK RGYRIATTH+  D VS+YDMDWSCPTA
Sbjct: 176 RYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGYRIATTHVGMDAVSIYDMDWSCPTA 235

Query: 565 IVVGNENKGISDEALQLSDLHCSIPMRGMVDSFNVSVAAGLLMHHAIRDRTSRMGSHGDL 386
           IVVGNEN+GISDEAL+LSDLHCSIPM+GMVDSFNVSVAAG+LMH A+ DRTSR+GSHGDL
Sbjct: 236 IVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHQAVCDRTSRLGSHGDL 295

Query: 385 TKEESQILLAEFFLRHSGTTTSIANEYAKRKLAAATSKL 269
           T  ES++LLAEF LRHS +  SIA+EYAKRK A    KL
Sbjct: 296 TLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPKL 334



 Score =  169 bits (427), Expect(2) = e-112
 Identities = 91/134 (67%), Positives = 108/134 (80%)
 Frame = -1

Query: 1199 AAAISAELSEDLNKDTVEDLLVKKKDVGRLMKMERKHELEFCSNGSKHWFPYLDKFTVLS 1020
            AAA+S E ++D   +TVE LL  + DV RLMKMER+ + E   +GS+ WFPYLD++   S
Sbjct: 47   AAAVSLESADDSKNETVEHLLSNRDDVLRLMKMERRPDAE--KSGSR-WFPYLDRYKCGS 103

Query: 1019 GDYLNSAEVLEAVDPYIMDMRKERFRNAVKNRSYSVCLVVEGLADFGNVSAAFRSADAMG 840
            G+ L+ +EVLEAV PYIM+ RKERF N VKNRSYSVCLVVEGL+DFGNVSAAFRSADA+G
Sbjct: 104  GE-LSGSEVLEAVGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALG 162

Query: 839  IQSVHVVSCDSSKR 798
             QSVHVVSCDSSKR
Sbjct: 163  FQSVHVVSCDSSKR 176


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
           [Cucumis sativus]
          Length = 370

 Score =  250 bits (638), Expect(2) = e-105
 Identities = 122/157 (77%), Positives = 137/157 (87%)
 Frame = -2

Query: 745 RYRDNRHVSMGAEKWLDIELWDSIQECFKHLKLRGYRIATTHLHKDTVSVYDMDWSCPTA 566
           RYR+NRHVSMGAEKWLDIELW+S  ECFK LK RGYRI +THL  + VSVYDMDWSCPTA
Sbjct: 209 RYRENRHVSMGAEKWLDIELWNSTPECFKILKSRGYRIVSTHLGANAVSVYDMDWSCPTA 268

Query: 565 IVVGNENKGISDEALQLSDLHCSIPMRGMVDSFNVSVAAGLLMHHAIRDRTSRMGSHGDL 386
           IVVGNE++GIS+EAL+LSDLHCSIPM GMVDSFNVSVAAG+LMHHA+ +RTSR+G HGDL
Sbjct: 269 IVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCNRTSRLGCHGDL 328

Query: 385 TKEESQILLAEFFLRHSGTTTSIANEYAKRKLAAATS 275
           T EE QILLAEF LRHS +  SIANE AKRK +A +S
Sbjct: 329 TSEERQILLAEFSLRHSKSAISIANELAKRKGSAISS 365



 Score =  160 bits (406), Expect(2) = e-105
 Identities = 92/154 (59%), Positives = 108/154 (70%), Gaps = 12/154 (7%)
 Frame = -1

Query: 1223 ATRCCFSTAAAISAELSEDL----------NKDTVEDLLVKKKDVGRLMKMERKH-ELEF 1077
            +TRC  S +AA S    ED+           +DTVE LL    DV RLMKMER+  EL+ 
Sbjct: 57   STRCFASISAATSPLEVEDIVADVEPPEVRTQDTVEHLLTHSNDVARLMKMERRSVELDG 116

Query: 1076 CSNGSK-HWFPYLDKFTVLSGDYLNSAEVLEAVDPYIMDMRKERFRNAVKNRSYSVCLVV 900
                 K  WFPYLDK++  S  +LNS E+LEA+D  I+D RKERF+N V+NRSYSVCLVV
Sbjct: 117  AEYPHKGRWFPYLDKYSCGSS-WLNSGEILEALDSLILDSRKERFKNVVRNRSYSVCLVV 175

Query: 899  EGLADFGNVSAAFRSADAMGIQSVHVVSCDSSKR 798
            EGL DFGNVSAAFRSADA+G QSVHVVSCD+SKR
Sbjct: 176  EGLTDFGNVSAAFRSADALGFQSVHVVSCDASKR 209


>ref|NP_197043.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
           thaliana] gi|7671508|emb|CAB89349.1| rRNA methylase-like
           protein [Arabidopsis thaliana]
           gi|110737570|dbj|BAF00727.1| rRNA methylase - like
           protein [Arabidopsis thaliana]
           gi|332004772|gb|AED92155.1| tRNA/rRNA methyltransferase
           (SpoU) family protein [Arabidopsis thaliana]
          Length = 350

 Score =  246 bits (629), Expect(2) = e-102
 Identities = 118/157 (75%), Positives = 135/157 (85%)
 Frame = -2

Query: 745 RYRDNRHVSMGAEKWLDIELWDSIQECFKHLKLRGYRIATTHLHKDTVSVYDMDWSCPTA 566
           RY  NRHVSMGAEKWLDIE WD+ +ECFK LK RGYRIATTHL  DTVS+YDMDWSCPTA
Sbjct: 193 RYNGNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTA 252

Query: 565 IVVGNENKGISDEALQLSDLHCSIPMRGMVDSFNVSVAAGLLMHHAIRDRTSRMGSHGDL 386
           IVVGNE +GISDEAL+LSDL CSIPM GMVDSFNVSVAAG+LMHHA+ DRT+R+GSHGDL
Sbjct: 253 IVVGNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAAGILMHHAVSDRTTRLGSHGDL 312

Query: 385 TKEESQILLAEFFLRHSGTTTSIANEYAKRKLAAATS 275
           ++ E +IL+AEF LRHS ++  IA E+AKRK   +TS
Sbjct: 313 SEAEKEILMAEFSLRHSRSSICIAYEFAKRKQQHSTS 349



 Score =  154 bits (390), Expect(2) = e-102
 Identities = 105/199 (52%), Positives = 130/199 (65%), Gaps = 15/199 (7%)
 Frame = -1

Query: 1349 MNSGCKTLARSSFSLLYY------NTSIQF-SLRPYSSHSGIKLQQ-CKKATRCCFSTAA 1194
            MNS CK+L R+S S   +      N SI F S+R +S  S +     C    R  F  A 
Sbjct: 1    MNS-CKSLIRASISSFPFVPLPNPNFSITFISVRAFSPLSVLHPNSSCIVTARRTFHGAV 59

Query: 1193 AISAE-LSEDLNKDTVEDLLVKKK-DVGRLMKMERKHELEFCSNGSKH----WFPYLDKF 1032
            A+S E L+E+  KDTV+ LL   + +   LMKMER+  L   SNG       WFPY D+F
Sbjct: 60   ALSPESLTEESPKDTVKGLLTTNRGEASSLMKMERRCSL---SNGEGDCRGSWFPYEDRF 116

Query: 1031 TVLSGD-YLNSAEVLEAVDPYIMDMRKERFRNAVKNRSYSVCLVVEGLADFGNVSAAFRS 855
                G+ +L+S EVLEAV P++M+ R +RFR  V+NRSYSVCLVVEGL+DFGN+SAAFRS
Sbjct: 117  RC--GEVHLSSREVLEAVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRS 174

Query: 854  ADAMGIQSVHVVSCDSSKR 798
            ADA+GIQSVHVVSCDSSKR
Sbjct: 175  ADALGIQSVHVVSCDSSKR 193