BLASTX nr result

ID: Lithospermum22_contig00023905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023905
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   173   2e-41
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...   172   2e-41
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-co...   157   8e-37

>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score =  173 bits (438), Expect = 2e-41
 Identities = 90/151 (59%), Positives = 103/151 (68%), Gaps = 2/151 (1%)
 Frame = -3

Query: 448 SRKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADDTPGSKIFIRGGLVTPNDKFK 269
           +RKKTPFQKH                RLY EFVESFQ D TPGSK F+RGG + PNDKFK
Sbjct: 7   TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDKFK 66

Query: 268 PDSEGGNSKDEGSGIKKGSRYVPSFLPPPMATKSR--DQXXXXXXXXXXXXXKPRNIDNF 95
            DSEG  SKD  SG KKGSRYVPSF+PPPMATK +  ++             K RNID+F
Sbjct: 67  DDSEGEKSKDGVSGPKKGSRYVPSFIPPPMATKGKESERKKEEEKPKEKEKGKSRNIDHF 126

Query: 94  MEELKQEQEMRERRNQGREHWREGRPSDNSV 2
           MEELK EQEMRERRNQ REHWR+GR +++S+
Sbjct: 127 MEELKHEQEMRERRNQEREHWRDGRHTEHSI 157


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 972

 Score =  172 bits (437), Expect = 2e-41
 Identities = 90/151 (59%), Positives = 103/151 (68%), Gaps = 2/151 (1%)
 Frame = -3

Query: 448 SRKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADDTPGSKIFIRGGLVTPNDKFK 269
           +RKKTPFQKH                RLY EFVESFQ D TPGSK F+RGG + PNDKFK
Sbjct: 7   TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDKFK 66

Query: 268 PDSEGGNSKDEGSGIKKGSRYVPSFLPPPMATKSR--DQXXXXXXXXXXXXXKPRNIDNF 95
            DSEG  SKD  SG KKGSRYVPSF+PPPMATK +  ++             K RNID+F
Sbjct: 67  DDSEGEKSKDGVSGPKKGSRYVPSFIPPPMATKGKESERKKEEEKLKEKEKGKARNIDHF 126

Query: 94  MEELKQEQEMRERRNQGREHWREGRPSDNSV 2
           MEELK EQEMRERRNQ REHWR+GR +++S+
Sbjct: 127 MEELKHEQEMRERRNQEREHWRDGRLTEHSI 157


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  159 bits (402), Expect = 3e-37
 Identities = 84/150 (56%), Positives = 98/150 (65%), Gaps = 2/150 (1%)
 Frame = -3

Query: 448 SRKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADDTPGSKIFIRGGLVTPNDKFK 269
           +RKKTPFQKH                RLY EFVESFQ D+ PGSK F+RGG + PN+K K
Sbjct: 7   TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLK 66

Query: 268 PDSEGGNSKDEGSGIKKGSRYVPSFLPPPMATKSR--DQXXXXXXXXXXXXXKPRNIDNF 95
            D+EG  SKD  S  KKGSRYVPSF+PPPMA K +  ++             K RNID+F
Sbjct: 67  SDAEGEKSKDGVSVPKKGSRYVPSFIPPPMAPKGKEPERKREEERPKEKEKGKTRNIDHF 126

Query: 94  MEELKQEQEMRERRNQGREHWREGRPSDNS 5
           MEELK E EMRERRNQ REHWREGR +++S
Sbjct: 127 MEELKHEHEMRERRNQEREHWREGRHTESS 156


>ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1|
           predicted protein [Populus trichocarpa]
          Length = 955

 Score =  159 bits (401), Expect = 4e-37
 Identities = 84/150 (56%), Positives = 99/150 (66%), Gaps = 2/150 (1%)
 Frame = -3

Query: 448 SRKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADDTPGSKIFIRGGLVTPNDKFK 269
           +RKKTPFQKH                RLY EFVESFQ D+ PGSK F+RGG + PN+K K
Sbjct: 7   TRKKTPFQKHREEEEARKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLK 66

Query: 268 PDSEGGNSKDEGSGIKKGSRYVPSFLPPPMATKSR--DQXXXXXXXXXXXXXKPRNIDNF 95
            DS+G  SKD  S  KKGSRYVPSF+PPPMA+K +  ++             K RNID+F
Sbjct: 67  IDSKGEKSKDGVSVPKKGSRYVPSFIPPPMASKGKELEKKREEERPKEKEKGKTRNIDHF 126

Query: 94  MEELKQEQEMRERRNQGREHWREGRPSDNS 5
           MEELK E EMRERRNQ REHWREGR +++S
Sbjct: 127 MEELKHEHEMRERRNQEREHWREGRHNESS 156


>ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Cucumis sativus] gi|449493301|ref|XP_004159248.1|
           PREDICTED: U2 snRNP-associated SURP motif-containing
           protein-like [Cucumis sativus]
          Length = 961

 Score =  157 bits (398), Expect = 8e-37
 Identities = 83/149 (55%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
 Frame = -3

Query: 448 SRKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADDTPGSKIFIRGGLVTPNDKFK 269
           +RKKTPFQKH                RLY EFVESFQ D+ PGSK F+RGG + PN+K K
Sbjct: 7   TRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLK 66

Query: 268 PDSEGGNSKDEGSGIKKGSRYVPSFLPPPMATKSRD-QXXXXXXXXXXXXXKPRNIDNFM 92
            +SEG  SKD  S  KKGSRYVPSF+PPP+A+K ++               K RNID+FM
Sbjct: 67  SESEGEKSKDGVSVPKKGSRYVPSFIPPPLASKGKESDKKELEKPKEKEKGKSRNIDHFM 126

Query: 91  EELKQEQEMRERRNQGREHWREGRPSDNS 5
           EELK EQE+RERRNQ REHWREGR  + S
Sbjct: 127 EELKHEQELRERRNQDREHWREGRHGEIS 155


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