BLASTX nr result

ID: Lithospermum22_contig00023888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023888
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002304676.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_003601754.1| Katanin p80 subunit-like protein [Medicago t...    66   3e-09
gb|AFK46474.1| unknown [Medicago truncatula]                           65   6e-09
ref|XP_002297848.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|222839307|gb|EEE77644.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 26/42 (61%), Positives = 37/42 (88%)
 Frame = -3

Query: 241 HHRVVDFGSFRTSGAAILVHALLYFALVCVFFVAVRVHFYIG 116
           HHR ++FG+F+TSG +ILVH++LYFAL+C+F +AV VH Y+G
Sbjct: 28  HHRFIEFGNFKTSGVSILVHSILYFALICIFLLAVGVHMYVG 69


>ref|XP_002304676.1| predicted protein [Populus trichocarpa] gi|222842108|gb|EEE79655.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 27/41 (65%), Positives = 37/41 (90%)
 Frame = -3

Query: 238 HRVVDFGSFRTSGAAILVHALLYFALVCVFFVAVRVHFYIG 116
           HR ++FG+F+TSGA+I+VH LLYFAL+CVF +AV+VH Y+G
Sbjct: 29  HRSIEFGNFQTSGASIMVHTLLYFALICVFLLAVKVHLYLG 69


>ref|XP_003601754.1| Katanin p80 subunit-like protein [Medicago truncatula]
           gi|355490802|gb|AES72005.1| Katanin p80 subunit-like
           protein [Medicago truncatula]
          Length = 69

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/40 (67%), Positives = 36/40 (90%)
 Frame = -3

Query: 235 RVVDFGSFRTSGAAILVHALLYFALVCVFFVAVRVHFYIG 116
           R ++FG+F+TS AAI+VH+LLYF LVC+F +A+RVHFYIG
Sbjct: 30  RCIEFGNFQTSAAAIVVHSLLYFGLVCLFLIAIRVHFYIG 69


>gb|AFK46474.1| unknown [Medicago truncatula]
          Length = 69

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 24/40 (60%), Positives = 38/40 (95%)
 Frame = -3

Query: 235 RVVDFGSFRTSGAAILVHALLYFALVCVFFVAVRVHFYIG 116
           ++V+FG+F+TSG +IL+H++LYFALVC+FF+A+R+H Y+G
Sbjct: 30  KMVEFGNFQTSGLSILIHSILYFALVCIFFLAIRIHMYMG 69


>ref|XP_002297848.1| predicted protein [Populus trichocarpa] gi|222845106|gb|EEE82653.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = -3

Query: 238 HRVVDFGSFRTSGAAILVHALLYFALVCVFFVAVRVHFYIG 116
           HR V+FG+F+TSGA+I+VH LLYFAL+CV  +AV+VH Y+G
Sbjct: 29  HRYVEFGNFQTSGASIMVHTLLYFALICVSLLAVKVHLYLG 69


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