BLASTX nr result

ID: Lithospermum22_contig00023873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023873
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK71841.1| hypothetical chloroplast RF2 [Acrotrema costatum]       55   4e-06
ref|YP_001468351.1| hypothetical chloroplast RF21 [Ipomoea purpu...    55   4e-06
ref|YP_007317292.1| Ycf2 (chloroplast) [Camellia sinensis] gi|43...    55   6e-06
emb|CAA47848.1| unnamed protein product [Cuscuta reflexa] gi|109...    55   6e-06
gb|AFU96471.1| Ycf2, partial (chloroplast) [Phyllanthus urinaria]      55   6e-06

>gb|AEK71841.1| hypothetical chloroplast RF2 [Acrotrema costatum]
          Length = 2297

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -1

Query: 207  HDLGVNESNYLSLGLLVNHLSSDCGRCS 124
            HDL VNESNYLSLGLLVNHLS DC RCS
Sbjct: 1761 HDLDVNESNYLSLGLLVNHLSGDCERCS 1788


>ref|YP_001468351.1| hypothetical chloroplast RF21 [Ipomoea purpurea]
            gi|157325596|ref|YP_001468373.1| hypothetical chloroplast
            RF21 [Ipomoea purpurea]
            gi|205412937|sp|A7Y3J6.1|YCF2_IPOPU RecName: Full=Protein
            ycf2 gi|157056801|gb|ABV02391.1| hypothetical chloroplast
            RF21 [Ipomoea purpurea] gi|157056824|gb|ABV02414.1|
            hypothetical chloroplast RF21 [Ipomoea purpurea]
          Length = 2197

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -1

Query: 285  LAYHLEFLIVRSM-PTICISSGMDYKHHDLGVNESNYLSLGLLVNHLSSDCGRCS 124
            L+  L+F + R+M P I     +    HDL VNESNYLSLGLLVNHLS DC RCS
Sbjct: 1631 LSITLQFELARAMSPCIIWIPNI----HDLDVNESNYLSLGLLVNHLSRDCERCS 1681


>ref|YP_007317292.1| Ycf2 (chloroplast) [Camellia sinensis]
            gi|435856436|ref|YP_007317311.1| Ycf2 (chloroplast)
            [Camellia sinensis] gi|430728316|gb|AGA55640.1| Ycf2
            (chloroplast) [Camellia sinensis]
            gi|430728335|gb|AGA55659.1| Ycf2 (chloroplast) [Camellia
            sinensis]
          Length = 2298

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -1

Query: 207  HDLGVNESNYLSLGLLVNHLSSDCGRCS 124
            HDL VNESNYLSLGLLVNHLS DC RCS
Sbjct: 1761 HDLDVNESNYLSLGLLVNHLSRDCERCS 1788


>emb|CAA47848.1| unnamed protein product [Cuscuta reflexa] gi|1096968|prf||2113216B
           ORF 740
          Length = 740

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -1

Query: 207 HDLGVNESNYLSLGLLVNHLSSDCGRCS 124
           HDL VNESNYLSLGLLVNHLS DC RCS
Sbjct: 200 HDLDVNESNYLSLGLLVNHLSRDCERCS 227


>gb|AFU96471.1| Ycf2, partial (chloroplast) [Phyllanthus urinaria]
          Length = 2559

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -1

Query: 207  HDLGVNESNYLSLGLLVNHLSSDCGRCS 124
            HDL VNESNYLSLGLLVNHLS DC RCS
Sbjct: 1921 HDLDVNESNYLSLGLLVNHLSRDCERCS 1948


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