BLASTX nr result
ID: Lithospermum22_contig00023835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00023835
(1351 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu... 427 e-117
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 426 e-117
ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 401 e-109
ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 401 e-109
emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera] 389 e-106
>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222870983|gb|EEF08114.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1320
Score = 427 bits (1097), Expect = e-117
Identities = 230/446 (51%), Positives = 299/446 (67%), Gaps = 17/446 (3%)
Frame = -3
Query: 1289 MGRKKQVRPHRSVGLL--ERATANEDSVVLDKEKEEGIESG---------KPYFVEVDRS 1143
MGR+KQ RPHRS GL+ A A+ + + ++ K ++ +PYFVEV+R+
Sbjct: 1 MGRRKQARPHRSGGLIIQNNAAASASAELKNQRKASSSDAQPTELVGIDEQPYFVEVERN 60
Query: 1142 NWNSDEHYDVSEVVLTNLKITEEYKGYVYKEDVYNDFRYFLRFRLSNVMEYV-DRIKLGH 966
+W S+ H D SE+VL L + +EY + + Y+D +Y LRFR+SNV + V RIKLGH
Sbjct: 61 SWASNHHRDASELVLHGLNLRQEYSSFRVTDGFYHDSKYSLRFRVSNVKQSVLSRIKLGH 120
Query: 965 WPVLSASDILVELGEKNEKEGMNE-DFVIMSANFDGSDEGVTGLVHLASLKFLTLRPXXX 789
WPV S+SDI +EL EK+ E E + VI S +FDG DEG+TGLVHL +++FLTLRP
Sbjct: 121 WPVFSSSDISLELIEKSMVEEDREVESVIFSGSFDGPDEGITGLVHLTNMEFLTLRPVLG 180
Query: 788 XXXXXXXXSLRMRVEIQKSAFDECESLLDHSRPLWKKSMMNIMAWMRPEVLTSESRYGSS 609
LRMRVEI + AFD CESLL+ +R +WKKSMMN+MAW+RPEV+TSE+RY +
Sbjct: 181 VDFSEKMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMNVMAWLRPEVMTSEARYRHA 240
Query: 608 GVTNMETDSPVNV-KNMSASRNQAGFDVAGFYDAIKPSKQEPMLEDHLPGLVSELRPYQR 432
T ME + + + S S +A FDVAG Y+AIKPSK +PMLED LP L+ LRPYQR
Sbjct: 241 KSTEMEVNMAAEIGDDTSNSGKRAQFDVAGLYEAIKPSKSDPMLEDDLPDLLPTLRPYQR 300
Query: 431 RAAYWMVRRERGVCQGFEGNSRDQFVSPLSIPVSLIDTSSNIHYNPFSGNLSLYDEHSVS 252
RAA+WMV++E+G + R QF SPL +PV +DT S + YNPFSGN+S + E S
Sbjct: 301 RAAHWMVQQEKG--ESSSVKERSQFFSPLCMPVDFLDTCSKMFYNPFSGNVSFHPEFSPP 358
Query: 251 YVQGGILADEMGLGKTVELLACILSHKMPSTELGKSVT---SHSENQENNLXXXXXXXXX 81
YV GGILADEMGLGKTVELLACIL+H+ +++ G V ++ NQ+ NL
Sbjct: 359 YVSGGILADEMGLGKTVELLACILAHRKSTSDDGSVVAPTWQNTGNQKINLKRLKRERVE 418
Query: 80 XXCGAVSENSRYRGLWVQCDICDAWQ 3
CGAVS++ +YRGLWVQCDICDAWQ
Sbjct: 419 CVCGAVSDSYKYRGLWVQCDICDAWQ 444
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 426 bits (1096), Expect = e-117
Identities = 230/442 (52%), Positives = 301/442 (68%), Gaps = 13/442 (2%)
Frame = -3
Query: 1289 MGRKKQVRPHRSVGLLERATANEDS---VVLDKEKEEGIESGK---PYFVEVDRSNWNSD 1128
MGR+KQ +PHRSVG++ER E + + +E +G E G P FVEVDR+ W S
Sbjct: 1 MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGDEVGDAETPLFVEVDRTGWGSG 60
Query: 1127 EHYDVSEVVLTNLKITEEYKGYVYKEDVYNDFRYFLRFRLSNVMEYVDRIKLGHWPVLSA 948
EH D+SE+VL +L + EE+ GY E Y + + LRFRL N ++V RI+LGHWPV++A
Sbjct: 61 EHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVAA 120
Query: 947 SDILVELGEKN-EKEGMNEDFVIMSANFDGSDEGVTGLVHLASLKFLTLRPXXXXXXXXX 771
S I +E EK +EG+ D VI+S FDG DEGV+GLVHL+ LK LTLRP
Sbjct: 121 SSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSEG 180
Query: 770 XXSLRMRVEIQKSAFDECESLLDHSRPLWKKSMMNIMAWMRPEVLTSESRYGSSGVTNME 591
+R+RVEI ++AFD CESLLD+SRPLWKKSMM++MAW+RPEV TSE+RYG + M+
Sbjct: 181 VSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKEMD 240
Query: 590 TDS--PVNVKNMSASRNQAGFDVAGFYDAIKPSKQEPMLEDHLPGLVSELRPYQRRAAYW 417
DS ++V ++ + ++Q FD AGFY+AIKPSK++P+L+ +P L+ ELRPYQRRAAYW
Sbjct: 241 IDSNMGMDVGDLDSKKHQ-NFDAAGFYEAIKPSKEDPLLDYDMPDLLPELRPYQRRAAYW 299
Query: 416 MVRRE-RGVCQGFEGNSRDQFVSPLSIPVSLIDTSSNIHYNPFSGNLSLYDEHSVSYVQG 240
MV+RE +G EG S SPL +PV +D+ + YNPFSGN+SL E+S V G
Sbjct: 300 MVQREIKG-----EGGS---LFSPLCMPVDFVDSFERMFYNPFSGNVSLRPEYSSLNVYG 351
Query: 239 GILADEMGLGKTVELLACILSHKMPSTELG---KSVTSHSENQENNLXXXXXXXXXXXCG 69
GILADEMGLGKTVELLACI +H+ P++E G + ++ Q+ NL CG
Sbjct: 352 GILADEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKRDHVECICG 411
Query: 68 AVSENSRYRGLWVQCDICDAWQ 3
AVSE+ RY+GLWVQCD+CDAWQ
Sbjct: 412 AVSESPRYKGLWVQCDVCDAWQ 433
>ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
SHPRH-like [Cucumis sativus]
Length = 1520
Score = 401 bits (1030), Expect = e-109
Identities = 221/448 (49%), Positives = 287/448 (64%), Gaps = 19/448 (4%)
Frame = -3
Query: 1289 MGRKKQVRPHRSVGL-LERATANEDSVVLDKEKEEGIESG--------KPYFVEVDRSNW 1137
MGR+KQ +P+RS G+ E ++ + +++ E +ES +P FVEVDRS W
Sbjct: 1 MGRRKQKQPNRSGGIRFEDRGDHKTQLDINEVVETAVESSDIKLDGVNEPIFVEVDRSGW 60
Query: 1136 NSDEHYDVSEVVLTNLKITEEYKGYVYKEDVYNDFRYFLRFRLSNVM-EYVDRIKLGHWP 960
S+EHYD+SEV L ++++ + G+ + V + RY LRFRL NV +DRIK GHWP
Sbjct: 61 YSNEHYDISEVFLADVRLEHPFVGFCLDKSVRENSRYSLRFRLCNVNGSLLDRIKFGHWP 120
Query: 959 VLSASDILVELGEKNEKEGMNEDFVIMSANFDGSDEGVTGLVHLASLKFLTLRPXXXXXX 780
VLS++D +E E++ +E + V++S N DG DE ++GLVHLA+LK +TLRP
Sbjct: 121 VLSSNDTFLEFIERDMEEDVKACSVVLSGNLDGPDEAISGLVHLANLKLMTLRPVDGVXF 180
Query: 779 XXXXXSLRMRVEIQKSAFDECESLLDHSRPLWKKSMMNIMAWMRPEVLTSESRYGSSGVT 600
SLR+RVEI SAFD CES+ D+ R LWKKSMMN + W+RPEV+ SE +YG +
Sbjct: 181 SQNMGSLRLRVEILSSAFDACESIFDNGRQLWKKSMMNTITWLRPEVVLSEVKYGVVKSS 240
Query: 599 NMETDSPVNV-KNMSASRNQAGFDVAGFYDAIKPSKQEPMLEDHLPGLVSELRPYQRRAA 423
NM+T + S SR A FD GFYDAIKPSK EPML++ +P L+ +LRPYQRRAA
Sbjct: 241 NMDTHLHHEAGDDTSNSRKHANFDTIGFYDAIKPSKDEPMLDEDIPNLLPKLRPYQRRAA 300
Query: 422 YWMVRRERGVCQGFEGNS----RDQFVSPLSIPVSLIDTSSNIHYNPFSGNLSLYDEHSV 255
YWM++RE+ GF GNS Q +SPL + + +DT + YNPFSGNL+L E +
Sbjct: 301 YWMIQREK----GFSGNSGLGENVQLISPLCMALKCLDTCLRVFYNPFSGNLTLNAEQVL 356
Query: 254 SYVQGGILADEMGLGKTVELLACILSHKMPSTELGK----SVTSHSENQENNLXXXXXXX 87
+V GGILADEMGLGKT+ELLACILSH+M E K V E+Q
Sbjct: 357 PHVYGGILADEMGLGKTIELLACILSHQMSVFEGRKGFDVEVQQLVEDQRTEFKRLKRER 416
Query: 86 XXXXCGAVSENSRYRGLWVQCDICDAWQ 3
CGAVSEN RY+GLWVQCDICDAWQ
Sbjct: 417 IECLCGAVSENYRYKGLWVQCDICDAWQ 444
>ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus]
Length = 1520
Score = 401 bits (1030), Expect = e-109
Identities = 220/448 (49%), Positives = 286/448 (63%), Gaps = 19/448 (4%)
Frame = -3
Query: 1289 MGRKKQVRPHRSVGL-LERATANEDSVVLDKEKEEGIESG--------KPYFVEVDRSNW 1137
MGR+KQ +P+RS G+ E ++ + +++ E +ES +P FVEVDRS W
Sbjct: 1 MGRRKQKQPNRSGGIRFEDRGDHKTQLDINEVVETAVESSDIKLDGVNEPIFVEVDRSGW 60
Query: 1136 NSDEHYDVSEVVLTNLKITEEYKGYVYKEDVYNDFRYFLRFRLSNVM-EYVDRIKLGHWP 960
S+EHYD+SEV L ++++ + G+ + V + RY LRFRL NV +DRIK GHWP
Sbjct: 61 YSNEHYDISEVFLADVRLEHPFVGFCLDKSVRENSRYSLRFRLCNVNGSLLDRIKFGHWP 120
Query: 959 VLSASDILVELGEKNEKEGMNEDFVIMSANFDGSDEGVTGLVHLASLKFLTLRPXXXXXX 780
VLS++D +E E++ +E + V++S N DG DE ++GLVHLA+LK +TLRP
Sbjct: 121 VLSSNDTFLEFIERDMEEDVKACSVVLSGNLDGPDEAISGLVHLANLKLMTLRPVDGVPF 180
Query: 779 XXXXXSLRMRVEIQKSAFDECESLLDHSRPLWKKSMMNIMAWMRPEVLTSESRYGSSGVT 600
SLR+RVEI SAFD CES+ D+ R LWKKSMMN + W+RPEV+ SE +YG +
Sbjct: 181 SQNMGSLRLRVEILSSAFDACESIFDNGRQLWKKSMMNTITWLRPEVVLSEVKYGVVKSS 240
Query: 599 NMETDSPVNV-KNMSASRNQAGFDVAGFYDAIKPSKQEPMLEDHLPGLVSELRPYQRRAA 423
NM+T + S SR A FD GFYDAIKPSK EPML++ +P L+ +LRPYQRRAA
Sbjct: 241 NMDTHLHHEAGDDTSNSRKHANFDTIGFYDAIKPSKDEPMLDEDIPNLLPKLRPYQRRAA 300
Query: 422 YWMVRRERGVCQGFEGNS----RDQFVSPLSIPVSLIDTSSNIHYNPFSGNLSLYDEHSV 255
YWM++RE+ GF GNS Q +SPL + + +DT + YNPFSGNL+L E +
Sbjct: 301 YWMIQREK----GFSGNSGLGENVQLISPLCMALKCLDTCLRVFYNPFSGNLTLNAEQVL 356
Query: 254 SYVQGGILADEMGLGKTVELLACILSHKMPSTELGK----SVTSHSENQENNLXXXXXXX 87
+V GGILADEMGLGKT+ELLACILSH+M E K V E+Q
Sbjct: 357 PHVYGGILADEMGLGKTIELLACILSHQMSVFEGRKGFDVEVQQLVEDQRTEFKRLKRER 416
Query: 86 XXXXCGAVSENSRYRGLWVQCDICDAWQ 3
CGAVSEN RY+GLWVQCDICDAWQ
Sbjct: 417 IECLCGAVSENYRYKGLWVQCDICDAWQ 444
>emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]
Length = 1111
Score = 389 bits (1000), Expect = e-106
Identities = 222/456 (48%), Positives = 291/456 (63%), Gaps = 27/456 (5%)
Frame = -3
Query: 1289 MGRKKQVRPHRSVGLLERATANEDS---VVLDKEKEEGIESGK---PYFVEVDRSNWNSD 1128
MGR+KQ +PHRSVG++ER E + + +E +G E G P FVEVDR+ W S
Sbjct: 1 MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGDEVGDAETPLFVEVDRTGWGSG 60
Query: 1127 EHYDVSEVVLTNLKITEEYKGYVYKEDVYNDFRYFLRFRLSNVMEYVDRIKLGHWPVLSA 948
EH D+SE+VL +L + EE+ GY L F + RI+LGHWPV++A
Sbjct: 61 EHLDISEIVLNDLNLREEFHGYS------------LGFGSAMRTSLWGRIRLGHWPVVAA 108
Query: 947 SDILVELGEKN-EKEGMNEDFVIMSANFDGSDEGVTGLVHLASLKFLTLRPXXXXXXXXX 771
S I +E EK +EG+ D VI+S FDG DEGV+GLVHL+ LK LTLRP
Sbjct: 109 SSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSEG 168
Query: 770 XXSLRMRVEIQKSAFDECESLLDHSRPLWKKSMMNIMAWMRPEVLTSESRYGSSGVTNME 591
+R+RVEI ++AFD CESLLD+SRPLWKKSMM++MAW+RPEV TSE+RYG + M+
Sbjct: 169 VSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKEMD 228
Query: 590 TDS--PVNVKNMSASRNQAGFDVAGFYDAIKPS--------------KQEPMLEDHLPGL 459
DS ++V ++ + ++Q FD AGFY+AIKPS +++P+L+ +P L
Sbjct: 229 IDSNMGMDVGDLDSKKHQ-NFDAAGFYEAIKPSNKWFPPILVAYLMYREDPLLDYDMPDL 287
Query: 458 VSELRPYQRRAAYWMVRRE-RGVCQGFEGNSRDQFVSPLSIPVSLIDTSSNIHYNPFSGN 282
+ ELRPYQRRAAYWMV+RE +G EG S SPL +PV +D+ + YNPFSGN
Sbjct: 288 LPELRPYQRRAAYWMVQREIKG-----EGGS---LFSPLCMPVDFVDSFERMFYNPFSGN 339
Query: 281 LSLYDEHSVSYVQGGILADEMGLGKTVELLACILSHKMPSTELG---KSVTSHSENQENN 111
+SL E+S V GGILADEMGLGKTVELLACI +H+ P++E G + ++ Q+ N
Sbjct: 340 VSLRPEYSSLNVYGGILADEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKIN 399
Query: 110 LXXXXXXXXXXXCGAVSENSRYRGLWVQCDICDAWQ 3
L CGAVSE+ RY+GLWVQCD+CDAWQ
Sbjct: 400 LKRLKRDHVECICGAVSESPRYKGLWVQCDVCDAWQ 435