BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023833
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   119   3e-25
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   115   3e-24
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp....    93   3e-17

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/158 (43%), Positives = 112/158 (70%)
 Frame = +1

Query: 1   IRRVISVMVEKRFFPKDFMLDMECNLLIQKLSDMGNSYAAEFVFRKAGDEKVKIRGTSYG 180
           I+ V+  MVEK   PK  +L  E + +IQK+ ++G ++AA+  F++A +EK+++   +YG
Sbjct: 296 IQIVMGSMVEKGLLPK--LLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYG 353

Query: 181 CMLQAFSKEGRVKEAIDIHQIVSRKNILVDEGCYRAFLECLCMGSPSEEVSESLKEVIGR 360
           CML+A +K+GRVKEAI ++ ++    + V +GCY AF+  LC   PS+EVS+ + E+IG+
Sbjct: 354 CMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIGK 413

Query: 361 GFRPSGTLLSKYISSLCSGKKWKQAEELLDIVLDKGFL 474
           GF P G+ LSK+I+SLC   +W +A++LL++ ++KG L
Sbjct: 414 GFSPCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLL 451


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/158 (43%), Positives = 99/158 (62%)
 Frame = +1

Query: 1   IRRVISVMVEKRFFPKDFMLDMECNLLIQKLSDMGNSYAAEFVFRKAGDEKVKIRGTSYG 180
           I RV+ +M EK   PK  +   +C+ +IQK SD+     A   FR+A DEK+ ++  +YG
Sbjct: 290 IERVMDIMAEKGLLPKCPL--SQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDATYG 347

Query: 181 CMLQAFSKEGRVKEAIDIHQIVSRKNILVDEGCYRAFLECLCMGSPSEEVSESLKEVIGR 360
           CML+A SKE RVKEAI ++ ++S K I V +  Y AFL+ L      EE  E L +++ R
Sbjct: 348 CMLKALSKEARVKEAIGLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEILGDMMRR 407

Query: 361 GFRPSGTLLSKYISSLCSGKKWKQAEELLDIVLDKGFL 474
           GFRP    LSK+I  L   ++W++ E+LLD+VL+KG L
Sbjct: 408 GFRPGTVGLSKFILLLSRKRRWREVEDLLDLVLEKGLL 445


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  119 bits (298), Expect = 3e-25
 Identities = 68/158 (43%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
 Frame = +1

Query: 1   IRRVISVMVEKRFFPKDFMLDMECN-LLIQKLSDMGNSYAAEFVFRKA-GDEKVKIRGTS 174
           I +V+ +MVEK+F     + D   N  +I++L DMG ++A+E +FRKA   E V++  ++
Sbjct: 307 IDKVLCLMVEKKFVT---LGDSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRLWDST 363

Query: 175 YGCMLQAFSKEGRVKEAIDIHQIVSRKNILV-DEGCYRAFLECLCMG-SPSEEVSESLKE 348
           YGCML+A S++ R KEA+D+++++ RK I V DE CY  F   LC   + SEE  E L +
Sbjct: 364 YGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYIEFANALCRDDNSSEEEEELLVD 423

Query: 349 VIGRGFRPSGTLLSKYISSLCSGKKWKQAEELLDIVLD 462
           VI RGF P    LS+ ++S+C  ++WK AE+LLD V++
Sbjct: 424 VIKRGFVPCTHKLSEVLASMCRKRRWKSAEKLLDSVME 461


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/158 (38%), Positives = 100/158 (63%)
 Frame = +1

Query: 1   IRRVISVMVEKRFFPKDFMLDMECNLLIQKLSDMGNSYAAEFVFRKAGDEKVKIRGTSYG 180
           I RV+++MV K+   K    D +   +IQKL D+G   AA   F++A DE++ ++  +YG
Sbjct: 319 IERVVAIMVGKQLLSKCPSSDYDS--IIQKLCDLGKVSAATLFFKRACDERIGLQDATYG 376

Query: 181 CMLQAFSKEGRVKEAIDIHQIVSRKNILVDEGCYRAFLECLCMGSPSEEVSESLKEVIGR 360
            ML+AFS EG ++EAI ++Q++  + + + +    AF++ L       E  E +++++ R
Sbjct: 377 RMLRAFSIEGILEEAIGLYQVILERGLTIKDNASDAFVDLLSEKDQYAEGYEIVRDIMRR 436

Query: 361 GFRPSGTLLSKYISSLCSGKKWKQAEELLDIVLDKGFL 474
           GF P  + LSKYI+ LC  ++WK+AEELL +VL+KG L
Sbjct: 437 GFSPCTSSLSKYITLLCKKRRWKEAEELLYMVLEKGLL 474


>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313697|gb|EFH44120.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/125 (43%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
 Frame = +1

Query: 1   IRRVISVMVEKRFFPK-DFMLDMECNLLIQKLSDMGNSYAAEFVFRKA-GDEKVKIRGTS 174
           I +V+  MVEK+F    D  L+ +   +I++L DMG ++A+E +FRKA   E V++R ++
Sbjct: 290 IDKVLGSMVEKKFLTLGDSALNDQ---MIERLCDMGKTFASEMLFRKACNGETVRLREST 346

Query: 175 YGCMLQAFSKEGRVKEAIDIHQIVSRKNI-LVDEGCYRAFLECLCM-GSPSEEVSESLKE 348
           YGCML+A S++ R KEA+D+++++ RK I ++DE CY  F   LC   + SEE  E L +
Sbjct: 347 YGCMLKALSRKERTKEAVDVYRMICRKGINVLDESCYNEFANALCRDDNSSEEGEELLVD 406

Query: 349 VIGRG 363
           VI RG
Sbjct: 407 VIKRG 411