BLASTX nr result

ID: Lithospermum22_contig00023765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023765
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   145   7e-33
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   133   5e-29
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   125   1e-26
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   125   1e-26
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   120   3e-25

>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  145 bits (367), Expect = 7e-33
 Identities = 87/183 (47%), Positives = 105/183 (57%), Gaps = 2/183 (1%)
 Frame = -2

Query: 636 IRALT-QPEPLL-RAFSTTPESPTQKLTRIADELLSLNKLERHDYAVLFRHKMGLNRYGP 463
           +R LT  P PLL R+ ST  E  TQKL RIADELL L K+ERHDYA+LFR+KMGLN+YGP
Sbjct: 14  VRLLTVAPRPLLVRSLSTVAEERTQKLERIADELLDLTKIERHDYAILFRYKMGLNKYGP 73

Query: 462 EVSGLASSSGPAVSXXXXXXXXXXXXAFDVKLEKFDAAGKIKVIKEIRGFTXXXXXXXXX 283
            VSGL++    A               FD+KLEKFDAA KIK+IKE+R FT         
Sbjct: 74  AVSGLSAPGSAAAGSAAAETKEAEKTVFDIKLEKFDAAAKIKIIKEVRTFT--------- 124

Query: 282 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELVEKAPVVVKKGVSKDEADAILEKLKGVG 103
                                         +LVEK PVV+KKGV+KD+ + I+EKLK +G
Sbjct: 125 ----------------------DLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELG 162

Query: 102 ATA 94
           ATA
Sbjct: 163 ATA 165


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  133 bits (334), Expect = 5e-29
 Identities = 84/179 (46%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
 Frame = -2

Query: 621 QPEPLLRAFSTTPESPTQKLTRIADELLSLNKLERHDYAVLFRHKMGLNRYGPEVSGLAS 442
           +P  ++   S++ E+ TQKL RIAD LL L K+ERHDYA+LFRHKMGL RYGP VSG A 
Sbjct: 23  KPITIISRSSSSSETQTQKLERIADVLLDLTKIERHDYAILFRHKMGLGRYGPAVSG-AI 81

Query: 441 SSGPA----VSXXXXXXXXXXXXAFDVKLEKFDAAGKIKVIKEIRGFTXXXXXXXXXXXX 274
            SGPA     S            AFD+KLEKFDAA KIKVIKE+R FT            
Sbjct: 82  LSGPAAPGSASGDVKTAAAAEKTAFDIKLEKFDAAAKIKVIKEVRTFT------------ 129

Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXELVEKAPVVVKKGVSKDEADAILEKLKGVGAT 97
                                      +LVEK PVV+KKG++K+EA  I+EKLK +GAT
Sbjct: 130 -------------------DLGLKEAKDLVEKVPVVLKKGLTKEEAGPIIEKLKALGAT 169


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  125 bits (313), Expect = 1e-26
 Identities = 77/161 (47%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
 Frame = -2

Query: 573 TQKLTRIADELLSLNKLERHDYAVLFRHKMGLNRYGPEVSGLAS--SSGPAVSXXXXXXX 400
           TQKL RIADELL L KLER+DY++LFR K+GLN+YGP VSGLAS  S+            
Sbjct: 32  TQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAK 91

Query: 399 XXXXXAFDVKLEKFDAAGKIKVIKEIRGFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
                AFD+KLEKFDAA KIK+IKE+R FT                              
Sbjct: 92  AAEKTAFDIKLEKFDAAAKIKIIKEVRTFT------------------------------ 121

Query: 219 XXXXXXXXXELVEKAPVVVKKGVSKDEADAILEKLKGVGAT 97
                    +LVEKAPVV+KKGV+K+E + I+EKLK +GAT
Sbjct: 122 -DLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLKELGAT 161


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  125 bits (313), Expect = 1e-26
 Identities = 77/161 (47%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
 Frame = -2

Query: 573 TQKLTRIADELLSLNKLERHDYAVLFRHKMGLNRYGPEVSGLAS--SSGPAVSXXXXXXX 400
           TQKL RIADELL L KLER+DY++LFR K+GLN+YGP VSGLAS  S+            
Sbjct: 482 TQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAK 541

Query: 399 XXXXXAFDVKLEKFDAAGKIKVIKEIRGFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
                AFD+KLEKFDAA KIK+IKE+R FT                              
Sbjct: 542 AAEKTAFDIKLEKFDAAAKIKIIKEVRTFT------------------------------ 571

Query: 219 XXXXXXXXXELVEKAPVVVKKGVSKDEADAILEKLKGVGAT 97
                    +LVEKAPVV+KKGV+K+E + I+EKLK +GAT
Sbjct: 572 -DLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLKELGAT 611


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  120 bits (301), Expect = 3e-25
 Identities = 75/163 (46%), Positives = 95/163 (58%)
 Frame = -2

Query: 588 TPESPTQKLTRIADELLSLNKLERHDYAVLFRHKMGLNRYGPEVSGLASSSGPAVSXXXX 409
           +PE+ T+KL RIAD+LL+LN++E +DY++LF HK+GLNRYG  V+ +A S G A      
Sbjct: 34  SPEARTKKLERIADDLLNLNRIELYDYSILFSHKLGLNRYGSAVA-VAGSDGEA--SGST 90

Query: 408 XXXXXXXXAFDVKLEKFDAAGKIKVIKEIRGFTXXXXXXXXXXXXXXXXXXXXXXXXXXX 229
                   AFDVKLEKF+ A KIKVIKEIR FT                           
Sbjct: 91  ETKTAEKTAFDVKLEKFETASKIKVIKEIRAFT--------------------------- 123

Query: 228 XXXXXXXXXXXXELVEKAPVVVKKGVSKDEADAILEKLKGVGA 100
                       ELVEKAPV+VKKG++K+EA+ I+EKLK VGA
Sbjct: 124 ----DLGLKEAKELVEKAPVIVKKGLTKEEAEKIMEKLKAVGA 162


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