BLASTX nr result

ID: Lithospermum22_contig00023744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023744
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26667.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250...    90   2e-16
ref|XP_002529444.1| RNA binding protein, putative [Ricinus commu...    86   4e-15
ref|NP_851194.1| SWAP/Surp domain-containing protein [Arabidopsi...    85   7e-15
dbj|BAB08579.1| unnamed protein product [Arabidopsis thaliana]         85   7e-15

>emb|CBI26667.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
 Frame = -3

Query: 241 MDLEVIGRHALLFDDDATSAFVNSDDALIEWNSLQIDRYDVRH-------XXXXXXXXXX 83
           MDLEV+GRHALLFDDDA SAFVNS+DAL+EWNSL IDRYDVRH                 
Sbjct: 1   MDLEVLGRHALLFDDDANSAFVNSNDALVEWNSLLIDRYDVRHLLPTPLPPLKRRRHHSS 60

Query: 82  XXXXXSNEDESKLDIERYLDLPP 14
                 ++ E +LD ER+LDLPP
Sbjct: 61  ALPAEISQLELELDQERFLDLPP 83


>ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250252 [Vitis vinifera]
          Length = 845

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
 Frame = -3

Query: 241 MDLEVIGRHALLFDDDATSAFVNSDDALIEWNSLQIDRYDVRH-------XXXXXXXXXX 83
           MDLEV+GRHALLFDDDA SAFVNS+DAL+EWNSL IDRYDVRH                 
Sbjct: 1   MDLEVLGRHALLFDDDANSAFVNSNDALVEWNSLLIDRYDVRHLLPTPLPPLKRRRHHSS 60

Query: 82  XXXXXSNEDESKLDIERYLDLPP 14
                 ++ E +LD ER+LDLPP
Sbjct: 61  ALPAEISQLELELDQERFLDLPP 83


>ref|XP_002529444.1| RNA binding protein, putative [Ricinus communis]
           gi|223531060|gb|EEF32910.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 915

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/89 (52%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
 Frame = -3

Query: 241 MDLEVIGRHALLFDDDATSAFVNSDDALIEWNSLQIDRYDVRHXXXXXXXXXXXXXXXSN 62
           MDLEVIGRHALLFDDDA +AFVNS +AL++WNSL IDRYDVRH               + 
Sbjct: 1   MDLEVIGRHALLFDDDALAAFVNSPEALVDWNSLSIDRYDVRHLLSSPPPPRNRHHRRNQ 60

Query: 61  ED----------ESKLDIERYLDLPPNEE 5
                       ES LD ERYLDLP   +
Sbjct: 61  HRSPSHNLDDSLESDLDHERYLDLPSTSD 89


>ref|NP_851194.1| SWAP/Surp domain-containing protein [Arabidopsis thaliana]
           gi|222423144|dbj|BAH19551.1| AT5G55100 [Arabidopsis
           thaliana] gi|332009197|gb|AED96580.1| SWAP/Surp
           domain-containing protein [Arabidopsis thaliana]
          Length = 843

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 241 MDLEVIGRHALLFDDDATSAFVNSDDALIEWNSLQIDRYDVRHXXXXXXXXXXXXXXXSN 62
           MDLE++GRHAL FDDD+ + FVNS  AL++WNSL IDRYDVRH               ++
Sbjct: 1   MDLEIVGRHALFFDDDSMATFVNSPTALVDWNSLFIDRYDVRHLLSSPPPPRIKRRRPNS 60

Query: 61  ED---ESKLDIERYLDLP 17
            D   ES+LD ERYLDLP
Sbjct: 61  NDADLESELDHERYLDLP 78


>dbj|BAB08579.1| unnamed protein product [Arabidopsis thaliana]
          Length = 875

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 241 MDLEVIGRHALLFDDDATSAFVNSDDALIEWNSLQIDRYDVRHXXXXXXXXXXXXXXXSN 62
           MDLE++GRHAL FDDD+ + FVNS  AL++WNSL IDRYDVRH               ++
Sbjct: 32  MDLEIVGRHALFFDDDSMATFVNSPTALVDWNSLFIDRYDVRHLLSSPPPPRIKRRRPNS 91

Query: 61  ED---ESKLDIERYLDLP 17
            D   ES+LD ERYLDLP
Sbjct: 92  NDADLESELDHERYLDLP 109


Top