BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023730
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    59   4e-07
gb|ABA93896.1| retrotransposon protein, putative, unclassified [...    55   5e-06

>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/108 (35%), Positives = 58/108 (53%)
 Frame = -3

Query: 325 LFGLDYVIQYK*GREDLVVDALSRIPYNELQIQAMSVVQPT*MIDISDTYIQDRWVQHII 146
           L G +Y ++YK GRE+   DALSR+ YN+ Q+ A+S V P  ++++  +Y  D   + +I
Sbjct: 208 LLGYNYKVEYKRGRENKATDALSRVRYND-QVVAISAVTPVWILEVLASYEGDEKCRDLI 266

Query: 145 SDIVIRPVQFPLSFYKEGLKL*KQDSIG**C*SEKTKILATLHDSAIG 2
           + I I P   P    K G+   K           K ++L T HDSA+G
Sbjct: 267 TQISISPTAQPNYSLKNGILRYKGRLYIGSNTGLKRQLLVTFHDSALG 314


>gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 897

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 LFGLDYVIQYK*GREDLVVDALSRIPYNE-LQIQAMSVVQPT*MIDISDTYIQDRWVQHI 149
           L GL Y +QYK G ++   DALSR P  + +QI A+S V P  + ++ + Y  +   + +
Sbjct: 382 LLGLQYKLQYKKGLDNKAADALSRYPQTDPMQICALSAVVPLWLNEVQEGYKTEPATEQL 441

Query: 148 ISDIVIRPVQFPLSFYKEGLKL*KQDSIG**C*SEKTKILATLHDSAIG 2
           ++ +++ P Q+P    ++G+ L K   +     + + +IL  LH SAIG
Sbjct: 442 LTQVLLSPDQYPHYTMQQGVLLYKGRILVGSNPALQHRILTALHASAIG 490