BLASTX nr result

ID: Lithospermum22_contig00023727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023727
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera]    42   6e-06

>emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera]
          Length = 994

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -2

Query: 327 PWCDHCQKPDHTKMVCWEV 271
           PWCDHC++P HTK  CW++
Sbjct: 517 PWCDHCRRPGHTKDTCWKI 535



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
 Frame = -3

Query: 278 GKSNNWTPGRQGGRRSFHNDHRGDSKGGGFQISGGHNGN-TAVTQQREPQILGFIKEQLE 102
           GK  +W P R      F ND  G              GN  ++ ++  P+   F KEQ+E
Sbjct: 537 GKPTDWKPSR------FANDKEGQ-------------GNLVSMDEKPSPKPTPFSKEQIE 577

Query: 101 QIQTLLQ---PSPSPSAITGGASCSVVKTGNITS 9
            +Q L     P+P+P+ +  G   S+ + GN  S
Sbjct: 578 VLQKLFSQSLPAPTPTVVGTG---SLAQKGNFLS 608


Top