BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023726
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    79   9e-18
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    83   3e-17
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                71   7e-17
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    76   9e-17
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-16

>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 78.6 bits (192), Expect(2) = 9e-18
 Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
 Frame = -2

Query: 577 GGRTPSFLYDNWHHSGILADLLSERKIGILRISPEESVAAIKGKVRWPKGRAHTTTIQVV 398
           G RT SF +DNW   G L D+  +R    L IS  ++VA      R  K R  T  +  +
Sbjct: 356 GART-SFWFDNWSGMGHLMDVTGQRGQIDLGISRNKTVAEAWSNRRRRKHR--TEQLNDI 412

Query: 397 KGLPNYLDEGK-----DSVVWFGTDRHLNSK-----VWKCLRERPENVRWWKVVWFKGQV 248
           +   N   + +     D+ +W G      +       W  +R++   V W+K VWF    
Sbjct: 413 EAALNQKYQTRNLLREDATLWRGKGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWFSHST 472

Query: 247 SVFGFIEWIVCLNRLTKKVQLKSWNVIQDDQCVFCLGKRETEQHLFFECSVRNC-WLELS 71
             + F  W+   NRL+   +++ WN   D +C FC    ET  HLFF CS  +  W  ++
Sbjct: 473 PKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIA 532

Query: 70  HRLI 59
             ++
Sbjct: 533 KNVL 536



 Score = 37.7 bits (86), Expect(2) = 9e-18
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -1

Query: 752 LWNLCSNKETL*VKWINNFRLKHQSL*GVKVRS-IDSWI*AKLLQLRDIIRPYVRME 585
           +W + SN ++L VKW     LK +S   +   S + SW+  K+L+ R+  +P+ R+E
Sbjct: 296 IWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVE 352


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 83.2 bits (204), Expect(2) = 3e-17
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
 Frame = -2

Query: 580  KGGRTPSFLYDNWHHSGILADLLSERKIGILRISPEESVAAIKGKVRWPKGRAHTTTI-- 407
            + G + SF YD+W H G L D+   R++  L I  E ++  +   +R  + R H   I  
Sbjct: 1246 RNGSSTSFWYDHWSHLGRLLDITGTRRVIDLGIPLETNLETV---LRTHQHRQHRAAIYN 1302

Query: 406  ----QVVKGLPNYLDEGKDSVVWFGTDRHLNSK-----VWKCLRERPENVRWWKVVWFKG 254
                ++ +      + G D  +W       N +      W  +R       W+K VWF  
Sbjct: 1303 RINAEIQRLQQQEREAGPDISLWRSLKNDFNKRFITKVTWNNVRTHQPQQNWYKGVWFPY 1362

Query: 253  QVSVFGFIEWIVCLNRLTKKVQLKSWNVIQDDQCVFCLGKRETEQHLFFECSVRN-CWLE 77
                + F+ W+   NRL+   ++K+WN  Q   C  C    ET  HLFF C   +  W  
Sbjct: 1363 STPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEA 1422

Query: 76   LSHRLI 59
            L+ RL+
Sbjct: 1423 LTQRLL 1428



 Score = 31.2 bits (69), Expect(2) = 3e-17
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 752  LWNLCSNKETL*VKWINNFRLKHQSL*GVKVR-SIDSWI*AKLLQLRDIIRPYVRME 585
            +W L S + +L V WI  F ++  +      R S+ SW+  KLL+ R++ +   ++E
Sbjct: 1188 IWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVE 1244


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 71.2 bits (173), Expect(2) = 7e-17
 Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
 Frame = -2

Query: 574  GRTPSFLYDNWHHSGILADLLSERKIGILRISPEESVAAIKGKVRWPKGRAHTTTIQVVK 395
            G + SF YD+W   G L D + ++    L I  E SVA      R  + R  T+ +  ++
Sbjct: 598  GESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASVA--DAWTRRSRRRHRTSLLNEIE 655

Query: 394  GLPNYL----DEGKDSVVWFGTDR----HLNSK-VWKCLRERPENVRWWKVVWFKGQVSV 242
             +  Y      + +D+V+W G +     H +++  W  ++     V W K VWF+     
Sbjct: 656  EMMAYQRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPK 715

Query: 241  FGFIEWIVCLNRLTKKVQLKSWNV--IQDDQCVFCLGKRETEQHLFFECS 98
            +    W+   NRL    ++  WN        CV C    +T +HLFF CS
Sbjct: 716  YALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCS 765



 Score = 42.0 bits (97), Expect(2) = 7e-17
 Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -1

Query: 752 LWNLCSNKETL*VKWINNFRLKHQSL*GVKVR-SIDSWI*AKLLQLRDIIRPYVRME 585
           +W + SN  +L  KW+  + ++ +S+  +K   S+ SWI  K+L++RD+ + + R+E
Sbjct: 538 VWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVE 594


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 75.9 bits (185), Expect(2) = 9e-17
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
 Frame = -2

Query: 574  GRTPSFLYDNWHHSGILADLLSERKIGILRISPEESVAAIKGKVRWPKGRAHTTTIQVVK 395
            G+  SF YD+W   G + + + ++ I  L I  ++ VA +     W   R+       + 
Sbjct: 1175 GQRTSFWYDDWSCMGRIMNFIGDKGIIDLGIKRDKLVAEV-----WDTHRSRRHITDYLN 1229

Query: 394  GLPNYLDEGK-------DSVVWFGTD-----RHLNSKVWKCLRERPENVRWWKVVWFKGQ 251
             + N +   K       D VVW G +     +      W  +R     V W+K VWF   
Sbjct: 1230 QVENVIATSKANRKEKADDVVWRGRNDIYKPQFSTRDTWNNIRTTATKVTWYKGVWFYQA 1289

Query: 250  VSVFGFIEWIVCLNRLTKKVQLKSWNVIQDDQCVFCLGKRETEQHLFFEC 101
               F F  W+  L+RL+   ++ +W  +    CVFC    ++  HLFF C
Sbjct: 1290 TPKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNC 1339



 Score = 37.0 bits (84), Expect(2) = 9e-17
 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = -1

Query: 752  LWNLCSNKETL*VKWINNFRLKHQSL*GVK-VRSIDSWI*AKLLQLRDIIRPYVRMEH*G 576
            +W + S+ ++L VKWI    LK+ S   +K   ++ SW+  KLL+ R++ + + ++E   
Sbjct: 1115 IWRILSHGDSLWVKWIETNLLKNNSFWIIKSSTTMGSWMWKKLLKYREVAKTFSKIEVHN 1174

Query: 575  RQDT*FF 555
             Q T F+
Sbjct: 1175 GQRTSFW 1181


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 81.3 bits (199), Expect(2) = 2e-16
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
 Frame = -2

Query: 574 GRTPSFLYDNWHHSGILADLLSERKIGILRISPEESVAAIKGKVRWPKGRAHTT----TI 407
           G T S  +DNWH    LAD   ER I    ++    V  +     W             I
Sbjct: 238 GMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPII 297

Query: 406 QVVKGLPNYLDEGKDSVVWFGTDRHLNSK--VWKCLRERPENVRWWKVVWFKGQVSVFGF 233
           + +    N     KD +VW  +  H  S    W+ LR   + V W  +VWFK  V    F
Sbjct: 298 EAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSF 357

Query: 232 IEWIVCLNRLTKKVQLKSWNVIQDDQCVFCLGKRETEQHLFFECS-VRNCWLELSHR 65
           + W+    +LT + +L  + +   ++C  CL   E   HLFFECS  +  W ++  R
Sbjct: 358 LLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR 414



 Score = 30.8 bits (68), Expect(2) = 2e-16
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 752 LWNLCSNKE-TL*VKWINNFRLKHQSL*GVKVRSIDSWI*AKLLQLRDIIRPYVR 591
           +WNLC++ + ++   WI +  L+ ++   +K     SW   K+L+LR +  P ++
Sbjct: 178 IWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMK 232