BLASTX nr result

ID: Lithospermum22_contig00023581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023581
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298662.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002274610.2| PREDICTED: translocon-associated protein sub...    71   1e-10
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...    71   1e-10
emb|CBI21297.3| unnamed protein product [Vitis vinifera]               71   1e-10
gb|ABK94173.1| unknown [Populus trichocarpa]                           70   2e-10

>ref|XP_002298662.1| predicted protein [Populus trichocarpa] gi|222845920|gb|EEE83467.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
 Frame = +2

Query: 95  MAQQPT---IFVVLLSVFLTSFSALGLSENPFMVAHKRVTLTKLKSSSAERVSVSIDIYN 265
           MA Q T   +F ++LS+ L S S++  S+ PF+VAHK+ TL+ LKS  AERVSVSIDIYN
Sbjct: 1   MANQITTKPLFTLVLSLLLVS-SSIASSDVPFIVAHKKATLSSLKSG-AERVSVSIDIYN 58

Query: 266 RGSATAYDITL 298
           +GS+TAYDITL
Sbjct: 59  QGSSTAYDITL 69


>ref|XP_002274610.2| PREDICTED: translocon-associated protein subunit beta isoform 2
           [Vitis vinifera]
          Length = 189

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +2

Query: 110 TIFVVLLSVFLTSFSALGLSENPFMVAHKRVTLTKLKSSSAERVSVSIDIYNRGSATAYD 289
           T+  V++++ L S S LG S+ PF+VAHK+ +LT+LKS  AERVSVSIDIYN+GS TAYD
Sbjct: 4   TLISVVVALILVS-STLGSSDVPFIVAHKKASLTRLKSG-AERVSVSIDIYNQGSTTAYD 61

Query: 290 ITL 298
           ++L
Sbjct: 62  VSL 64


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +2

Query: 110 TIFVVLLSVFLTSFSALGLSENPFMVAHKRVTLTKLKSSSAERVSVSIDIYNRGSATAYD 289
           T+  V++++ L S S LG S+ PF+VAHK+ +LT+LKS  AERVSVSIDIYN+GS TAYD
Sbjct: 4   TLISVVVALILVS-STLGSSDVPFIVAHKKASLTRLKSG-AERVSVSIDIYNQGSTTAYD 61

Query: 290 ITL 298
           ++L
Sbjct: 62  VSL 64


>emb|CBI21297.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +2

Query: 110 TIFVVLLSVFLTSFSALGLSENPFMVAHKRVTLTKLKSSSAERVSVSIDIYNRGSATAYD 289
           T+  V++++ L S S LG S+ PF+VAHK+ +LT+LKS  AERVSVSIDIYN+GS TAYD
Sbjct: 4   TLISVVVALILVS-STLGSSDVPFIVAHKKASLTRLKSG-AERVSVSIDIYNQGSTTAYD 61

Query: 290 ITL 298
           ++L
Sbjct: 62  VSL 64


>gb|ABK94173.1| unknown [Populus trichocarpa]
          Length = 196

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = +2

Query: 113 IFVVLLSVFLTSFSALGLSENPFMVAHKRVTLTKLKSSSAERVSVSIDIYNRGSATAYDI 292
           +F +LLS+ L S S+L  S+ PF+VAHK+ T   LKS  AERVSVSIDIYN+GS+TAYDI
Sbjct: 10  LFSILLSLLLVS-SSLASSDVPFIVAHKKATPRGLKSG-AERVSVSIDIYNQGSSTAYDI 67

Query: 293 TL 298
           TL
Sbjct: 68  TL 69


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