BLASTX nr result

ID: Lithospermum22_contig00023562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023562
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550707.1| PREDICTED: protein COBRA-like [Glycine max]        66   4e-16
gb|AFZ78569.1| COBRA-like protein [Populus tomentosa]                  71   1e-15
ref|XP_002330107.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-15
gb|ABK96050.1| unknown [Populus trichocarpa]                           71   1e-15
gb|ABD96927.1| hypothetical protein [Cleome spinosa]                   67   2e-15

>ref|XP_003550707.1| PREDICTED: protein COBRA-like [Glycine max]
          Length = 454

 Score = 66.2 bits (160), Expect(3) = 4e-16
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
 Frame = -1

Query: 376 WPWMDARMN---MGGENGESTGDCSRFKGNIPHCCEKTPTVVEMLPGVVYSQR 227
           W W    +    MGG+  E  GDCSRFKGNIPHCC+K PTVV++LPG  Y+Q+
Sbjct: 85  WTWAKKEVIWNVMGGQTTEQ-GDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQ 136



 Score = 35.8 bits (81), Expect(3) = 4e-16
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 227 ISACCKSGVLESWDQDP-RPVYTLQVSVGQSETSSNFPK 114
           I+ CC  GVL SW QDP   + + Q+SVG + T++   K
Sbjct: 137 IANCCSGGVLTSWAQDPENAISSFQLSVGSAGTTNKTVK 175



 Score = 26.9 bits (58), Expect(3) = 4e-16
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 123 LP*NFPLRDPAPGYAC 76
           LP NF L+ P PGY C
Sbjct: 176 LPKNFTLKAPGPGYTC 191


>gb|AFZ78569.1| COBRA-like protein [Populus tomentosa]
          Length = 453

 Score = 70.9 bits (172), Expect(2) = 1e-15
 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = -1

Query: 376 WPWMDARM--NMGGENGESTGDCSRFKGNIPHCCEKTPTVVEMLPGVVYSQRFLPAAK 209
           W W    +  +M G      GDCS+FKGNIPHCC+KTPTVV++LPGV Y+Q+F    K
Sbjct: 88  WSWAKKEVLWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCK 145



 Score = 37.0 bits (84), Expect(2) = 1e-15
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 224 SACCKSGVLESWDQDP-RPVYTLQVSVGQSETSSNFPK 114
           S CCK GV+ +W QDP   V   QVSVG + TS+   K
Sbjct: 141 SNCCKGGVMAAWGQDPTASVSAFQVSVGLAGTSNKTVK 178


>ref|XP_002330107.1| predicted protein [Populus trichocarpa] gi|222871241|gb|EEF08372.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 70.9 bits (172), Expect(2) = 1e-15
 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = -1

Query: 376 WPWMDARM--NMGGENGESTGDCSRFKGNIPHCCEKTPTVVEMLPGVVYSQRFLPAAK 209
           W W    +  +M G      GDCS+FKGNIPHCC+KTPTVV++LPGV Y+Q+F    K
Sbjct: 88  WSWAKKEVLWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCK 145



 Score = 37.0 bits (84), Expect(2) = 1e-15
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 224 SACCKSGVLESWDQDP-RPVYTLQVSVGQSETSSNFPK 114
           S CCK GV+ +W QDP   V   QVSVG + TS+   K
Sbjct: 141 SNCCKGGVMAAWGQDPTASVSAFQVSVGLAGTSNKTVK 178


>gb|ABK96050.1| unknown [Populus trichocarpa]
          Length = 453

 Score = 70.9 bits (172), Expect(2) = 1e-15
 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = -1

Query: 376 WPWMDARM--NMGGENGESTGDCSRFKGNIPHCCEKTPTVVEMLPGVVYSQRFLPAAK 209
           W W    +  +M G      GDCS+FKGNIPHCC+KTPTVV++LPGV Y+Q+F    K
Sbjct: 88  WSWAKKEVLWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCK 145



 Score = 37.0 bits (84), Expect(2) = 1e-15
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 224 SACCKSGVLESWDQDP-RPVYTLQVSVGQSETSSNFPK 114
           S CCK GV+ +W QDP   V   QVSVG + TS+   K
Sbjct: 141 SNCCKGGVMAAWGQDPTASVSAFQVSVGLAGTSNKTVK 178


>gb|ABD96927.1| hypothetical protein [Cleome spinosa]
          Length = 436

 Score = 67.4 bits (163), Expect(3) = 2e-15
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = -1

Query: 376 WPWMDARMNMGGENGEST--GDCSRFKGNIPHCCEKTPTVVEMLPGVVYSQRFLPAAK 209
           W W    +  G   G++T  GDCSRFKGNIPHCC++ PTVV+++PG  Y+Q+     K
Sbjct: 64  WTWAKREVIWGMNGGQTTEQGDCSRFKGNIPHCCKQDPTVVDLMPGTPYNQQIANCCK 121



 Score = 33.5 bits (75), Expect(3) = 2e-15
 Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -3

Query: 227 ISACCKSGVLESWDQDP-RPVYTLQVSVGQSETSS 126
           I+ CCK GV+ S+ QDP   V   Q++VGQ+ T++
Sbjct: 116 IANCCKGGVINSFAQDPATTVSAFQLTVGQAGTTN 150



 Score = 25.8 bits (55), Expect(3) = 2e-15
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 123 LP*NFPLRDPAPGYAC 76
           +P NF L+ P PGY C
Sbjct: 155 VPKNFTLKAPGPGYTC 170


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