BLASTX nr result

ID: Lithospermum22_contig00023561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023561
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    97   1e-18
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002336768.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17

>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +1

Query: 1   LLYGCFLHGNVDIAEIACENLFELEPDNEQNFELLMKVYHNAGRLEDVKKVRLMMVERGL 180
           LLY C+LH +VDIAEIA E LFELEPDNE NFELLMK+Y NAGR ED K+V+LMM ERGL
Sbjct: 428 LLYACYLHSDVDIAEIAAERLFELEPDNELNFELLMKIYGNAGRSEDEKRVKLMMAERGL 487

Query: 181 D 183
           +
Sbjct: 488 N 488


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +1

Query: 1   LLYGCFLHGNVDIAEIACENLFELEPDNEQNFELLMKVYHNAGRLEDVKKVRLMMVERGL 180
           LLY C+LH +VDIAEIA E LFELEPDNE NFELLMK+Y NAGR ED K+V+LMM ERGL
Sbjct: 428 LLYACYLHSDVDIAEIAAERLFELEPDNELNFELLMKIYGNAGRSEDEKRVKLMMAERGL 487

Query: 181 D 183
           +
Sbjct: 488 N 488


>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = +1

Query: 1   LLYGCFLHGNVDIAEIACENLFELEPDNEQNFELLMKVYHNAGRLEDVKKVRLMMVERGL 180
           LLY C+LH NVD  EIA + LF+LEPDNE NFELLMK+Y NAGRLED ++VR MMV+RGL
Sbjct: 383 LLYSCYLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYDNAGRLEDAERVRKMMVDRGL 442


>ref|XP_002336768.1| predicted protein [Populus trichocarpa] gi|222836677|gb|EEE75070.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = +1

Query: 1   LLYGCFLHGNVDIAEIACENLFELEPDNEQNFELLMKVYHNAGRLEDVKKVRLMMVERGL 180
           LLY C+LH NVD  EIA + LF+LEPDNE NFELLMK+Y NAGRLED ++VR MMV+RGL
Sbjct: 34  LLYSCYLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYDNAGRLEDAERVRKMMVDRGL 93


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/61 (70%), Positives = 48/61 (78%)
 Frame = +1

Query: 1   LLYGCFLHGNVDIAEIACENLFELEPDNEQNFELLMKVYHNAGRLEDVKKVRLMMVERGL 180
           LLY C+ H NVDI +IA E LFELEPDNE NFELLM +Y N GRLEDV+KVR MM +RG 
Sbjct: 453 LLYACYFHHNVDIGKIAAECLFELEPDNEHNFELLMNIYRNVGRLEDVEKVRKMMADRGF 512

Query: 181 D 183
           D
Sbjct: 513 D 513


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