BLASTX nr result

ID: Lithospermum22_contig00023509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023509
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       38   6e-06
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    46   1e-05

>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 37.7 bits (86), Expect(2) = 6e-06
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
 Frame = +3

Query: 237 HNLLASSTSTNAPS--VNSSIDNKCKDMS------VEESLLWHCRLGHLPFDRIAHIHSI 392
           + L+ S+ S  +PS   N+++   C ++S      +  S LWH R+GHL   R++H+ S 
Sbjct: 497 YRLVVSADSFQSPSHRFNNNLFVSCNNVSQSHFIVIPNSALWHYRMGHLSHQRLSHMQSF 556

Query: 393 RSM 401
            S+
Sbjct: 557 LSI 559



 Score = 37.0 bits (84), Expect(2) = 6e-06
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 1   NALHIPDFHYNLISVQKLTSDLKAQIIFTDHSCILQGHSQK 123
           N L+ P F+ NLISV K+   L   + F+  SCI+Q  S K
Sbjct: 444 NVLYCPTFNLNLISVSKMCKSLSCFVNFSTDSCIIQELSTK 484


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 46.2 bits (108), Expect(2) = 1e-05
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +1

Query: 1   NALHIPDFHYNLISVQKLTSDLKAQIIFTDHSCILQ--GHSQKAPLVRALRTLHH 159
           + L+IP F +NLIS+ KL S +  ++IF+  SC+LQ   +  K  +V A   L+H
Sbjct: 797 DVLYIPSFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLYH 851



 Score = 27.7 bits (60), Expect(2) = 1e-05
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 237 HNLLASSTSTNAPSVNSSIDN-KCKDMSVEESLLWHCRLGHLPFDRI 374
           ++L+ +  +T A  VNS+I + +C  + ++   LWH RLGH   +RI
Sbjct: 850 YHLIPNQLTTKA--VNSTITHPRCNVIPID---LWHFRLGHPSAERI 891


Top